G12585


Basic Information

Item Value
gene id G12585
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 14427625 ~ 14428817 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU15536
ACAATACCAATGCAGGGAAACTGGCAATTTTATTAATGGACGAAACACCAAAGTGTCTTTACTATGGCCATTGATGACAGTGTTAAAAGCAAAAGTGCTTTATTTCAGACCACCACATGCATATGGCCACTTGCCTCACCTGTACTTTAACTTGAACTGGACAGCTGATGCCAAGGACTTACTGTTAACCATTTCATCTGTGCACCAGTAACCTGCAGCTGTATGGAATATCATTTTAAGATGGCAACCGTCAGCAGAATCCCTCAGGTCCTGTGTGATGAATCGATCTCTTACTGCGCATCCCCAGTGTAATTACACAACACATATTTGGTTGAATGACTTCTGTGTTTCTTCTTGACCATTGGAAGAGTGCAtgtgcgtgtgggtgtgtgtgctgGTTTGGCATTCTTTGCCAGACAAGATGGAAATTTAAATGCTCAGCAAATCACTGTCTTACCAAAATCTTTCATTCTCAGCTTTAGATGGTATCTACCTTCTGTTCTCTTCTGTCTGTTCAGGTAGATTTGCACCTGATGGATTTTGACTCGTTAACCTGGCAAATCCCAACTGTTTGGAAATCAAAGTATGCAAAATATGGGCTCATGAATTGTAGAAATACATGGTCAAATAAGAGGCAACAGGAGGTATTGTCTATTAACTAGAATAATGGTGTGATTGGTCAGTGAGTGGAATGTGTAGATCTAGCCAAATTGTTGTCATGGAGTTACATAACCTTTGcagatattatatttttaagaccttttgtgaaactgaatgactgacttGTAACACACAGGTACATTAGACACaattctttgtttaatttagatattttgttttttgttgtgttttttgtagttGCCACACTATTAAATCCGGTGCTTAGTTCTCCCATGTGCCCTGCAACAGTGTAGATTACTGTATGTTAAACAGAAGGTGCCTGTGTATATAGCTcctttgtaatgctttatcCGCACATTTCCTTACTGATATGTGAAGTGTGAAGACGTCAATCCAGATAATTTACTACTGAAAGGTCTTAGATGAAAGCCACTATTAAACTATGAAATtgcttcatttgaaaataacCCGTTATTTTATATTGTGCATTGTTTATTGCCTGTCTCATTGGTTTGTGACTTTTTCAGTTATTCTTCCTAATGCTGTATGCagacacaatattattatttcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15536 True 1193 lncRNA 0.38 1 14427625 14428817

Neighbor

gene id symbol gene type direction distance location
AMCG00016283 tiprl coding downstream 33964 14389509 ~ 14393661 (-)
AMCG00016284 NA coding downstream 38146 14383900 ~ 14389479 (-)
AMCG00016280 sim2,LOC108234774 coding downstream 103450 14306299 ~ 14324175 (-)
AMCG00016277 NA coding downstream 158310 14268166 ~ 14269315 (-)
AMCG00016276 NA coding downstream 159810 14267636 ~ 14267815 (-)
AMCG00016282 NA coding upstream 8571 14437388 ~ 14456052 (-)
AMCG00016287 NA coding upstream 149040 14577857 ~ 14591958 (-)
AMCG00016289 zpld1,LOC105030973,LOC103372413 coding upstream 280571 14709388 ~ 14733458 (-)
AMCG00016294 NA coding upstream 421033 14849850 ~ 14851113 (-)
AMCG00016303 NA coding upstream 708591 15137408 ~ 15139859 (-)
G12373 NA non-coding downstream 767966 13657443 ~ 13659659 (-)
G12358 NA non-coding downstream 788035 13638303 ~ 13639590 (-)
G12359 NA non-coding downstream 788475 13627255 ~ 13639150 (-)
G12235 NA non-coding downstream 1327401 13097991 ~ 13100224 (-)
G12096 NA non-coding downstream 1788927 12638493 ~ 12638698 (-)
G12594 NA non-coding upstream 2795 14431612 ~ 14436531 (-)
G12595 NA non-coding upstream 34800 14463617 ~ 14463823 (-)
G12702 NA non-coding upstream 764385 15193202 ~ 15193641 (-)
G12707 cntn5 non-coding upstream 988206 15417023 ~ 15417518 (-)
G12743 NA non-coding upstream 1118233 15547050 ~ 15605487 (-)
AMCG00016281 NA other downstream 335 14420356 ~ 14427290 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 868441 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 1557065 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 2098592 12323161 ~ 12329033 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other downstream 2480303 11832428 ~ 11947322 (-)
AMCG00016293 NA other upstream 356381 14785198 ~ 14791969 (-)
AMCG00016327 NA other upstream 2041794 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 2429724 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 2437501 16866318 ~ 16870002 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other upstream 2834784 17263601 ~ 17266747 (-)

Expression


Co-expression Network