G12712


Basic Information

Item Value
gene id G12712
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 15464077 ~ 15464312 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU15728
tctgcctgtacttctcagcattgaggagaccattcattctgaccaaatccccaactccatttgcagaaatgcagccccaaacttgcaaggaacctccaccatgcttcactgttgcctgcagacactcattcgtgtaccgctctccagcccttcggccaacaaactgccttctgctgcagacagatatttcacattttgactcatcagtccagagcacctgctgccatttttctgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15728 True 236 lncRNA 0.40 1 15464077 15464312

Neighbor

gene id symbol gene type direction distance location
AMCG00016301 cntn5 coding upstream 21869 15424622 ~ 15442208 (+)
AMCG00016299 cntn5 coding upstream 57326 15379324 ~ 15406751 (+)
AMCG00016300 NA coding upstream 96308 15366518 ~ 15367769 (+)
AMCG00016297 dlg2 coding upstream 359059 15087879 ~ 15105018 (+)
AMCG00016296 LOC107589373,LOC106951534,LOC102797415,LOC103129241,LOC106903426,LOC107100026 coding upstream 409152 15053045 ~ 15054925 (+)
AMCG00016307 NA coding downstream 65448 15529760 ~ 15547602 (+)
AMCG00016305 NA coding downstream 168076 15632388 ~ 15644947 (+)
AMCG00016306 NA coding downstream 185839 15650151 ~ 15657395 (+)
AMCG00016311 yap1,LOC107746561,LOC107687356 coding downstream 196007 15660319 ~ 15662260 (+)
AMCG00016312 yap1,LOC107662128,LOC107758259,LOC107746561,LOC107687356 coding downstream 219122 15683434 ~ 15697259 (+)
G12605 NA non-coding upstream 848368 14576587 ~ 14615709 (+)
G12591 NA non-coding upstream 1012323 14451510 ~ 14451754 (+)
G12589 NA non-coding upstream 1014865 14448812 ~ 14449212 (+)
G12566 NA non-coding upstream 1065663 14397249 ~ 14398414 (+)
G12549 NA non-coding upstream 1079420 14383905 ~ 14384657 (+)
G12763 NA non-coding downstream 276874 15741186 ~ 15743647 (+)
G12816 NA non-coding downstream 455271 15919583 ~ 15924725 (+)
G12886 NA non-coding downstream 1068792 16533104 ~ 16533381 (+)
G12896 NA non-coding downstream 1144406 16608718 ~ 16608985 (+)
G12901 NA non-coding downstream 1159371 16623683 ~ 16623967 (+)
AMCG00016288 NA other upstream 680542 14745316 ~ 14783535 (+)
G12587 NA other upstream 1025471 14437771 ~ 14438606 (+)
G12351 NA other upstream 1827076 13635442 ~ 13637001 (+)
G12349 NA other upstream 1832280 13631285 ~ 13631797 (+)
G12348 NA other upstream 1836366 13621879 ~ 13627711 (+)
AMCG00016329 NA other downstream 1020043 16484355 ~ 16486003 (+)
G13012 NA other downstream 1652481 17116793 ~ 17121932 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other downstream 2098106 17562418 ~ 17599581 (+)
AMCG00016407 NA other downstream 2954705 18419017 ~ 18473689 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 4410744 19875056 ~ 19879725 (+)

Expression


Co-expression Network