G12743



Basic Information


Item Value
gene id G12743
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 15547050 ~ 15605487 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU15762
aggtgttcctaataatcctttaggtgagtgtatatatatatatatatatatatattttttttttttttaaataagcaaatgcTATGATCAAATGCTTTCAAGAGAGAAAgttcacaatacaaatacattatctgTAAATCTGTCacaaaaagaagaggaaaaataagcaaatttgGCATTGGTGCATTTGAACTACTTGTTCCAAATATGGAAAGTACTATCCCTATCTAAAAGTATATATTACTGAACTAATATAATCTATTGTTGAGGTTGAGATCTATTGCATATTAGCTATGCACACGTCTGACAGGTGCAGGCACAGAAATGAAAAGCTGCCTTTACAAAAATCACTGTACATGCTATTGTCACCATGGATACCATGAAAATGAACTGCTCTTCCCTCATATTCATCAGAGAAAGACCACATAATTTTCAGGAATTAGACCAGTTTTGCCTTCATATGTTGCTTGGAGCCAACCAGGTTCCACTGAAGCATAAACTGTGggtggaaaagaaaatataaccaaaaaatacagaaactgaaatgttaCCCGGTGAGGTATGTATGTTAATTTTCTGTTGCACCGAAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU15762 True 591 lncRNA 0.38 2 15547050 15605487

Neighbor


gene id symbol gene type direction distance location
AMCG00016304 NA coding downstream 188716 15142256 ~ 15358334 (-)
AMCG00016302 NA coding downstream 404908 15140361 ~ 15142142 (-)
AMCG00016303 NA coding downstream 407191 15137408 ~ 15139859 (-)
AMCG00016294 NA coding downstream 695937 14849850 ~ 14851113 (-)
AMCG00016289 zpld1,LOC105030973,LOC103372413 coding downstream 813592 14709388 ~ 14733458 (-)
AMCG00016309 NA coding upstream 15569 15621056 ~ 15624452 (-)
AMCG00016316 NA coding upstream 129609 15735096 ~ 15740346 (-)
AMCG00016317 NA coding upstream 136954 15742441 ~ 15758023 (-)
AMCG00016315 NA coding upstream 199373 15804860 ~ 15824266 (-)
AMCG00016319 NA coding upstream 235772 15841259 ~ 15849112 (-)
G12707 cntn5 non-coding downstream 129532 15417023 ~ 15417518 (-)
G12702 NA non-coding downstream 353409 15193202 ~ 15193641 (-)
G12595 NA non-coding downstream 1083227 14463617 ~ 14463823 (-)
G12594 NA non-coding downstream 1110519 14431612 ~ 14436531 (-)
G12585 NA non-coding downstream 1118233 14427625 ~ 14428817 (-)
G12807 NA non-coding upstream 219424 15824911 ~ 15825237 (-)
G12809 NA non-coding upstream 223279 15828766 ~ 15829026 (-)
G12810 NA non-coding upstream 223868 15829355 ~ 15829567 (-)
G12811 NA non-coding upstream 229335 15834822 ~ 15835082 (-)
G12812 NA non-coding upstream 229707 15835194 ~ 15836468 (-)
AMCG00016293 NA other downstream 755081 14785198 ~ 14791969 (-)
AMCG00016281 NA other downstream 1119760 14420356 ~ 14427290 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 1987866 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 2676490 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 3218017 12323161 ~ 12329033 (-)
AMCG00016327 NA other upstream 865124 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 1253054 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 1260831 16866318 ~ 16870002 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other upstream 1658114 17263601 ~ 17266747 (-)
AMCG00016376 NA other upstream 1932547 17538034 ~ 17541342 (-)

Expression



Co-expression Network