G12945 (ucp2,ucp2b,LOC106567822)


Basic Information

Item Value
gene id G12945
gene name ucp2,ucp2b,LOC106567822
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 16858541 ~ 16861179 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU16024
CTCATTAGTAAACCCAGCATCTTTTAGTACAGATGTAACCAAAAAGTACAGAGACAATTTTGTGAAAAGATTTTATTTGTACCACAATTGCTTCAGGCTAGCAATAGGAATTAAAAATCTAACCTAGACAGGTTTTATACCCATTTTACAGCAAGCCAGACAGTCTTGAGGAATCTTTATTGTAAGAGATTAAGATGACTAAACCTAAAAGACCAGCTTTTACATGTTAGTTTAAAACCCAACTAAAACCAAAATGGTAAAATGCTACAGCACAGACAAGAAAAGTGCAGAAAGTAGCACTGGCACTACAGGGACATTCACAGAGGAGAGGCCCAGTTGTGGCGGGCCGCCATCATAGCACGTTTCAGCTGCTCATAGGTGACGAACATCACCACGTTCCAGGAGCCGAGACGCAGGAAAGAGGGCATGAACCTTTATAGAAGGCCATGGGCCCCTCCTTCGTCAACATGGCGAGTGCACAGTTCAAGGCACTGCTGTACTGGCCGAGCCCAGAGTTCATGTATCTTGTTTTCACTACATCCACAGGGGAAGCAATCACAGTGGTGCAGAAACCCGCACCAAAAGCAGATGTGAAGTGGCATGGAAGGGTATCTGGGGAAGAAGAGATGCTGAAATACAGAAACCGCCAACCTGGGCCACCACTCATTACAGGCAGAGCTTCAgggtatatacacacacataccagtCATTGGGGTGGATCGCAGGAGAGCATCTTTGATAAGGTCATAGGTCACTAGTTCAGTGCAGTTCACGATGGCATTGCGGGCGATATTTGGTGTAGTTCCTGTGGGACAAGATGGACAATGGCCAGATTAGAGAGCTGAAGAGGCCGATTAACACCATCTGTACAATAAGTGAACAGTTCTATAGTACAAAATCTCAATGTTTGAAGAATTTCATGGACTCAAATGCAGAATCACAGCCATAGCACAGTTCATACAGTCAAGTCAAGAAAACTCAATTTGTAAACTGCATTTGCTACTGTTCTTCTAGAAAGGCTGCTACACGTCACCCACCTCTCCACAGGCCACGTATGCCCTCCTCcctggcgatggtcttgtaagCGTCGATGGTCCCTTGGTATCGCTTGTTGCCACTGGCCGTGCCAACCTGGGCCTGGAATCGCACCTTCACCACATCAGTGGGCTGGGCCATGGCCACAGCCATCGCACCAGTGGTGCAGCCAGCTAGCAGACGGCTGCCAATCCCAGCATCTAGTGGACGGAGAGAGGGCACTGGTCACACCTATGCCAGTCTGACAGACTACATCACCTTTTCAGAATTCCAATAGCAGTGGTAAGCCACACTTACTGCAAACAggtttaatgtaaatttcaataaatgcTCCACACTCAAGTGTATGGGGGCACTTTTAGCAAGAGCAATGCAATGGCTTgtcaaactgatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaNNNNNNNNNNNNNNNNNNNNNNATTTGAAGATCAGGACTTTTCTTACAATCCATGAAGGAGTTTAACACACTGAAGTTTGTGATTAACCTGAGCCAAACTATAAAATACTGGCGATTAAGCATATTCAAAATTAAGTCAACCCCAAACCACCACCCCCTTTAAGAGTTCTGCAATGGATGGTCAATTGATGTGCAAGAACTCACGCTCGGCTCCTTTGGTGTAGAACTGTTTGACCGAATCATAGAGTCCGATACGGACAGAGGCAAAGCTCATTTGGCGCTGGAGCCCAGCCACCAGCCCGTTGTACAGACTCCTCGGCCCCTCAGTCTTCACCATGGTGTTGATGGTGCCAAACACACCACTGTATTTCACCAATTTGACATTGGGAGCAGCGgctttggaCTGGAGCCTGACTTTGGCCGTGTCGAGGGGGAATGTGAAGAGGTCTGCAATGCAGGCGGCAGTACCAGCGCCAATGAACTTCACTGCAGCCGTAGGGGGGACATCAGCGGGCCCGAATCCAACCATGATCACCAAGTTATTGGGGAACGTGCAGAACAGAACTGGCGACGTCGAGATGAAGTGAAAACAAGGCAGATGAACTCTAAAAGACT
>TU16025
CTCATTAGTAAACCCAGCATCTTTTAGTACAGATGTAACCAAAAAGTACAGAGACAATTTTGTGAAAAGATTTTATTTGTACCACAATTGCTTCAGGCTAGCAATAGGAATTAAAAATCTAACCTAGACAGGTTTTATACCCATTTTACAGCAAGCCAGACAGTCTTGAGGAATCTTTATTGTAAGAGATTAAGATGACTAAACCTAAAAGACCAGCTTTTACATGTTAGTTTAAAACCCAACTAAAACCAAAATGGTAAAATGCTACAGCACAGACAAGAAAAGTGCAGAAAGTAGCACTGGCACTACAGGGACATTCACAGAGGAGAGGCCCAGTTGTGGCGGGCCGCCATCATAGCACGTTTCAGCTGCTCATAGGTGACGAACATCACCACGTTCCAGGAGCCGAGACGCAGGAAAGAGGGCATGACCCTTTATAGAAGGCCATGGGCCCCTCCTTCGTCAACATGGCGAGTGCACAGTTCAAGGCACTGCTGTACTGGCCGAGCCCAGAGTTCATGTATCTTGTTTTCACTACATCCACAGGGGAAGCAATCACAGTGGTGCAGAAACCCGCACCAAAAGCAGATGTGAAGTGGCATGGAAGGGTATCTGGGGAAGAAGAGATGCTGAAATACAGAAACCGCCAACCTGGGCCACCACTCATTACAGGCAGAGCTTCAgggtatatacacacacataccagtCATTGGGGTGGATCGCAGGAGAGCATCTTTGATAAGGTCATAGGTCACTAGTTCAGTGCAGTTCACGATGGCATTGCGGGCGATATTTGGTGTAGTTCCTCCACAGGCCACGTATGCCCTCCTCcctggcgatggtcttgtaagCGTCGATGGTCCCTTGGTATCGCTTGTTGCCACTGGCCGTGCCAACCTGGGCCTGGAATCGCACCTTCACCACATCAGTGGGCTGGGCCATGGCCACAGCCATCGCACCAGTGGTGCAGCCAGCTAGCAGACGGCTGCCAATCCCAGCATCTAGTGGACGGAGAGAGGGCACTGGTCACACCTATGCCAGTCTGACAGACTACATCACCTTTTCAGAATTCCAATAGCAGTGGTAAGCCACACTTACTGCAAACAggtttaatgtaaatttcaataaatgcTCCACACTCAAGTGTATGGGGGCACTTTTAGCAAGAGCAATGCAATGGCTTgtcaaactgatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaNNNNNNNNNNNNNNNNNNNNNNATTTGAAGATCAGGACTTTTCTTACAATCCATGAAGGAGTTTAACACACTGAAGTTTGTGATTAACCTGAGCCAAACTATAAAATACTGGCGATTAAGCATATTCAAAATTAAGTCAACCCCAAACCACCACCCCCTTTAAGAGTTCTGCAATGGATGGTCAATTGATGTGCAAGAACTCACGCTCGGCTCCTTTGGTGTAGAACTGTTTGACCGAATCATAGAGTCCGATACGGACAGAGGCAAAGCTCATTTGGCGCTGGAGCCCAGCCACCAGCCCGTTGTACAGACTCCTCGGCCCCTCAGTCTTCACCATGGTGTTGATGGTGCCAAACACACCACTGTATTTCACCAATTTGACATTGGGAGCAGCGgctttggattctccttggatGGAGCCTGACTTTGGCCGTGTCGAGGGGGAATGTGAAGAGGTCTGCAATGCAGGCGGCAGTACCAGCGCCAATGAACTTCACTGCAGCCGTAGGGGGGACATCAGCGGGCCCGAATCCAACCATGATCACCAAGTTATTGGGGAACGTGCAGAACAGAACTGGCGACGTCGAGATGAAGTGAAAACAAGGCAGATGAACTCTAAAAGACT
>TU16027
CTCATTAGTAAACCCAGCATCTTTTAGTACAGATGTAACCAAAAAGTACAGAGACAATTTTGTGAAAAGATTTTATTTGTACCACAATTGCTTCAGGCTAGCAATAGGAATTAAAAATCTAACCTAGACAGGTTTTATACCCATTTTACAGCAAGCCAGACAGTCTTGAGGAATCTTTATTGTAAGAGATTAAGATGACTAAACCTAAAAGACCAGCTTTTACATGTTAGTTTAAAACCCAACTAAAACCAAAATGGTAAAATGCTACAGCACAGACAAGAAAAGTGCAGAAAGTAGCACTGGCACTACAGGGACATTCACAGAGGAGAGGCCCAGTTGTGGCGGGCCGCCATCATAGCACGTTTCAGCTGCTCATAGGTGACGAACATCACCACGTTCCAGGAGCCGAGACGCAGGAAAGAGGGCATGACCCTTTATAGAAGGCCATGGGCCCCTCCTTCGTCAACATGGCGAGTGCACAGTTCAAGGCACTGCTGTACTGGCCGAGCCCAGAGTTCATGTATCTTGTTTTCACTACATCCACAGGGGAAGCAATCACAGTGGTGCAGAAACCCGCACCAAAAGCAGATGTGAAGTGGCATGGAAGGGTATCTGGGGAAGAAGAGATGCTGAAATACAGAAACCGCCAACCTGGGCCACCACTCATTACAGGCAGAGCTTCAgggtatatacacacacataccagtCATTGGGGTGGATCGCAGGAGAGCATCTTTGATAAGGTCATAGGTCACTAGTTCAGTGCAGTTCACGATGGCATTGCGGGCGATATTTGGTGTAGTTCCTCCACAGGCCACGTATGCCCTCCTCcctggcgatggtcttgtaagCGTCGATGGTCCCTTGGTATCGCTTGTTGCCACTGGCCGTGCCAACCTGGGCCTGGAATCGCACCTTCACCACATCAGTGGGCTGGGCCATGGCCACAGCCATCGCACCAGTGGTGCAGCCAGCTAGCAGACGGCTGCCAATCCCAGCATCTAGTGGACGGAGAGAGGGCACTGGTCACACCTATGCCAGTCTGACAGACTACATCACCTTTTCAGAATTCCAATAGCAGTGGTAAGCCACACTTACTGCAAACAggtttaatgtaaatttcaataaatgcTCCACACTCAAGTGTATGGGGGCACTTTTAGCAAGAGCAATGCAATGGCTTgtcaaactgatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaNNNNNNNNNNNNNNNNNNNNNNATTTGAAGATCAGGACTTTTCTTACAATCCATGAAGGAGTTTAACACACTGAAGTTTGTGATTAACCTGAGCCAAACTATAAAATACTGGCGATTAAGCATATTCAAAATTAAGTCAACCCCAAACCACCACCCCCTTTAAGAGTTCTGCAATGGATGGTCAATTGATGTGCAAGAACTCACGCTCGGCTCCTTTGGTGTAGAACTGTTTGACCGAATCATAGAGTCCGATACGGACAGAGGCAAAGCTCATTTGGCGCTGGAGCCCAGCCACCAGCCCGTTGTACAGACTCCTCGGCCCCTCAGTCTTCACCATGGTGTTGATGGTGCCAAACACACCACTGTATTTCACCAATTTGACATTGGGAGCAGCGgctttggatCTGGAGCCTGACTTTGGCCGTGTCGAGGGGGAATGTGAAGAGGTCTGCAATGCAGGCGGCAGTACCAGCGCCAATGAACTTCACTGCAGCCGTAGGGGGGACATCAGCGGGCCCGAATCCAACCATGATCACCAAGTTATTGGGGAACGTGCAGAACAGAACTGGCGACGTCGAGATGAAGTGAAAACAAGGCAGATGAACTCTAAAAGACT

Function

symbol description
ucp2 Predicted to enable oxidative phosphorylation uncoupler activity. Predicted to be involved in adaptive thermogenesis; mitochondrial transmembrane transport; and response to cold. Predicted to act upstream of or within mitochondrial transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in several structures, including blood; brain; cardiovascular system; pleuroperitoneal region; and ventral mesoderm. Human ortholog(s) of this gene implicated in artery disease (multiple); diabetic neuropathy; end stage renal disease; non-alcoholic fatty liver disease; and obesity. Orthologous to human UCP2 (uncoupling protein 2).

NR:

description
PREDICTED: mitochondrial uncoupling protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16024 True 2075 TUCP 0.46 3 16858541 16861179
TU16025 False 1851 TUCP 0.47 4 16858541 16861179
TU16027 False 1842 TUCP 0.47 4 16858541 16861179

Neighbor

gene id symbol gene type direction distance location
AMCG00016344 ppme1,LOC107548200 coding downstream 36171 16811036 ~ 16822370 (-)
AMCG00016336 LOC107680719 coding downstream 83669 16757415 ~ 16774872 (-)
AMCG00016335 NA coding downstream 105551 16587491 ~ 16752990 (-)
AMCG00016333 NA coding downstream 271875 16576609 ~ 16586666 (-)
AMCG00016331 NA coding downstream 350134 16504216 ~ 16508407 (-)
AMCG00016343 NA coding upstream 1 16861180 ~ 16864392 (-)
AMCG00016342 NA coding upstream 15093 16876272 ~ 16880591 (-)
AMCG00016348 NA coding upstream 68249 16929428 ~ 16938560 (-)
AMCG00016350 NA coding upstream 148552 17009731 ~ 17023094 (-)
AMCG00016351 LOC106613240,LOC107600776,LOC107577125 coding upstream 179126 17040305 ~ 17071447 (-)
G12921 NA non-coding downstream 66872 16791423 ~ 16791669 (-)
G12915 NA non-coding downstream 108622 16749719 ~ 16749919 (-)
G12902 NA non-coding downstream 234635 16623683 ~ 16623906 (-)
G12897 NA non-coding downstream 249597 16608718 ~ 16608944 (-)
G12894 NA non-coding downstream 262321 16595678 ~ 16596220 (-)
G12978 NA non-coding upstream 57387 16918566 ~ 16924672 (-)
G13045 rps3 non-coding upstream 380765 17241944 ~ 17246330 (-)
G13065 clns1a,LOC102781126 non-coding upstream 423224 17284403 ~ 17286829 (-)
G13091 NA non-coding upstream 514087 17375266 ~ 17377539 (-)
G13126 NA non-coding upstream 632676 17493855 ~ 17494346 (-)
AMCG00016327 NA other downstream 383371 16470611 ~ 16475170 (-)
AMCG00016293 NA other downstream 2066572 14785198 ~ 14791969 (-)
AMCG00016281 NA other downstream 2431251 14420356 ~ 14427290 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 3299357 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 3987981 12849878 ~ 12870560 (-)
AMCG00016345 NA other upstream 5139 16866318 ~ 16870002 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other upstream 402422 17263601 ~ 17266747 (-)
AMCG00016376 NA other upstream 676855 17538034 ~ 17541342 (-)
G13367 NA other upstream 2230060 19091239 ~ 19105381 (-)
AMCG00016453 NA other upstream 3267729 20128908 ~ 20135547 (-)

Expression


Co-expression Network