G13267


Basic Information

Item Value
gene id G13267
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 18265202 ~ 18265406 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU16442
catgctcatttggtgtccaagGAACaagtccagtctatttttgaatgttcccaaatgttcagcttcaaccacatcgctggggagtttgttccagattgtgtctactctctatgtgaagaagtgtctccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtttgatgcctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16442 True 205 lncRNA 0.46 1 18265202 18265406

Neighbor

gene id symbol gene type direction distance location
AMCG00016393 tmem135,LOC107718730,LOC107701128,LOC107693910 coding upstream 100073 18157707 ~ 18165129 (+)
AMCG00016394 tmem135,LOC107701128 coding upstream 164399 18098011 ~ 18100803 (+)
AMCG00016388 NA coding upstream 180099 18081922 ~ 18085103 (+)
AMCG00016387 pdgfd coding upstream 377466 17875444 ~ 17887736 (+)
AMCG00016386 NA coding upstream 573942 17686856 ~ 17691260 (+)
AMCG00016397 NA coding downstream 99332 18364738 ~ 18370387 (+)
AMCG00016411 fat3 coding downstream 363022 18628428 ~ 18635806 (+)
AMCG00016412 NA coding downstream 397596 18663002 ~ 18663364 (+)
AMCG00016405 NA coding downstream 438461 18703867 ~ 18762647 (+)
AMCG00016408 mtnr1b,LOC103355263 coding downstream 526517 18791923 ~ 19090628 (+)
G13266 NA non-coding upstream 2859 18259268 ~ 18262343 (+)
G13174 NA non-coding upstream 584293 17658757 ~ 17680909 (+)
G13021 NA non-coding upstream 1118204 17143610 ~ 17146998 (+)
G13019 NA non-coding upstream 1131672 17133314 ~ 17133530 (+)
G12966 NA non-coding upstream 1388300 16876345 ~ 16876902 (+)
G13270 NA non-coding downstream 4627 18270033 ~ 18274439 (+)
G13273 grm5,LOC102779205,LOC106613232,LOC106581415 non-coding downstream 22634 18288040 ~ 18288261 (+)
G13274 NA non-coding downstream 45122 18310528 ~ 18315356 (+)
G13323 NA non-coding downstream 518042 18783448 ~ 18826531 (+)
G13342 NA non-coding downstream 825835 19091241 ~ 19105528 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 665621 17562418 ~ 17599581 (+)
G13012 NA other upstream 1143270 17116793 ~ 17121932 (+)
AMCG00016329 NA other upstream 1779199 16484355 ~ 16486003 (+)
AMCG00016288 NA other upstream 3481667 14745316 ~ 14783535 (+)
G12587 NA other upstream 3826596 14437771 ~ 14438606 (+)
AMCG00016407 NA other downstream 153611 18419017 ~ 18473689 (+)
AMCG00016429 lamtor1,LOC106581407 other downstream 1609650 19875056 ~ 19879725 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other downstream 3516700 21782106 ~ 21832148 (+)
AMCG00016502 NA other downstream 5600861 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 5672645 23938051 ~ 23945024 (+)

Expression


Co-expression Network