G13339



Basic Information


Item Value
gene id G13339
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 19058405 ~ 19058673 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU16525
gctcagcagatacaatctcagcagcacaggctattcagagggacttagataatattcagttgtgggccgacacctggcagatgaaattcaatgtggacaagtgcaaggtaatacatgcaggtaacaaaaatgttcactataattacactatgggaggaatagaactagatgaagtaacgcatgagaaagacctaggagtctatgtggactcctcactttctccatccaaacaatgtggggaagcaataaaaaaggcaaacaggatgtta

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU16525 True 269 lncRNA 0.45 1 19058405 19058673

Neighbor


gene id symbol gene type direction distance location
AMCG00016404 NA coding downstream 18901 19025838 ~ 19039504 (-)
AMCG00016403 NA coding downstream 43656 19006083 ~ 19014749 (-)
AMCG00016402 NA coding downstream 156824 18897556 ~ 18901581 (-)
AMCG00016401 NA coding downstream 622377 18420753 ~ 18436028 (-)
AMCG00016400 NA coding downstream 658647 18380464 ~ 18399758 (-)
AMCG00016409 NA coding upstream 50469 19109142 ~ 19143518 (-)
AMCG00016410 NA coding upstream 96661 19155334 ~ 19161728 (-)
AMCG00016414 NA coding upstream 126265 19184938 ~ 19205594 (-)
AMCG00016419 NA coding upstream 218625 19277298 ~ 19279668 (-)
AMCG00016420 mre11a coding upstream 223029 19281702 ~ 19316677 (-)
G13334 NA non-coding downstream 156429 18826194 ~ 18901976 (-)
G13254 NA non-coding downstream 892635 18162787 ~ 18165770 (-)
G13129 NA non-coding downstream 1562058 17495923 ~ 17496347 (-)
G13126 NA non-coding downstream 1564059 17493855 ~ 17494346 (-)
G13091 NA non-coding downstream 1680866 17375266 ~ 17377539 (-)
G13341 NA non-coding upstream 18695 19077368 ~ 19077823 (-)
G13366 NA non-coding upstream 29551 19088224 ~ 19088632 (-)
G13392 NA non-coding upstream 106913 19165586 ~ 19253414 (-)
G13413 NA non-coding upstream 197965 19256638 ~ 19256919 (-)
G13414 NA non-coding upstream 199650 19258323 ~ 19258557 (-)
AMCG00016376 NA other downstream 1517063 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 1791658 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 2188403 16866318 ~ 16870002 (-)
G12945 ucp2,ucp2b,LOC106567822 other downstream 2197226 16858541 ~ 16861179 (-)
AMCG00016327 NA other downstream 2583235 16470611 ~ 16475170 (-)
G13367 NA other upstream 32566 19091239 ~ 19105381 (-)
AMCG00016453 NA other upstream 1070235 20128908 ~ 20135547 (-)
AMCG00016479 NA other upstream 1557836 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 1607469 20666142 ~ 20683024 (-)
G13962 NA other upstream 4396419 23455092 ~ 23455811 (-)

Expression



Co-expression Network