G13680


Basic Information

Item Value
gene id G13680
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20315742 ~ 20316579 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU16939
TCAAAGAATGACattctttattgtgtttaaaaaacatagaattaaacacaaatccaaaacttaaagaaaaaagaaaagaaaaaacaggctCACAGGTGTTAGTCTGTgaaaacatgttcaaaaaaGTGCTTTAATCTCCCTGTTCTTATCAACACTGTCTGTGCATGCAGGTCTGTTTTTCAGCCAGTGCTGGGGAATTCCCAGGGACACTGCATTTGGCTGTGCCCACTGTTTGACAGCACTTTGCAGATATACCATTCATAAGCAAACAGCTGTGCCTGTGATTGCCCAGACATGACTGTAAACCCATACATATACCTGAAGCCGACAGAGTCACTCATGCAGGATGTGAAATTCATCCGCTGATTCGCAGAAGCGTATTTGGGGaaatagtaaataaaatcaTTGGTGATCTTCTGATTGAGTGCTGACTGCTCAAACTTGTCTATGATATCTTCTGGGATTTCTGTTGACCTCCC

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU16939 True 479 lncRNA 0.51 2 20315742 20316579

Neighbor

gene id symbol gene type direction distance location
AMCG00016462 kpna1,LOC102776202 coding downstream 12668 20292302 ~ 20303074 (-)
AMCG00016463 spcs2,LOC107677086 coding downstream 25957 20285322 ~ 20289785 (-)
AMCG00016455 ddx10 coding downstream 33425 20255636 ~ 20282317 (-)
AMCG00016454 NA coding downstream 169441 20145813 ~ 20146301 (-)
AMCG00016452 NA coding downstream 220817 20089569 ~ 20094925 (-)
AMCG00016459 NA coding upstream 18309 20334888 ~ 20339043 (-)
AMCG00016461 eif2s3,if2g,LOC106590489,LOC107727229,LOC107686712 coding upstream 25501 20342080 ~ 20355124 (-)
AMCG00016464 NA coding upstream 40654 20357233 ~ 20362210 (-)
AMCG00016460 kif3a coding upstream 55975 20372554 ~ 20379132 (-)
AMCG00016473 sat1a.2,sat1,LOC107562204,LOC107591482,LOC107725150,LOC107654323 coding upstream 77018 20393597 ~ 20398749 (-)
G13615 NA non-coding downstream 310802 20003149 ~ 20004940 (-)
G13414 NA non-coding downstream 1057185 19258323 ~ 19258557 (-)
G13413 NA non-coding downstream 1058823 19256638 ~ 19256919 (-)
G13392 NA non-coding downstream 1062328 19165586 ~ 19253414 (-)
G13366 NA non-coding downstream 1227110 19088224 ~ 19088632 (-)
G13762 NA non-coding upstream 151667 20468246 ~ 20513404 (-)
G13766 NA non-coding upstream 170302 20486881 ~ 20492021 (-)
G13789 NA non-coding upstream 278750 20595329 ~ 20598765 (-)
G13806 NA non-coding upstream 330257 20646836 ~ 20652268 (-)
G13812 NA non-coding upstream 444844 20761423 ~ 20761693 (-)
AMCG00016453 NA other downstream 180195 20128908 ~ 20135547 (-)
G13367 NA other downstream 1210361 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 2774400 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 3048995 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 3445740 16866318 ~ 16870002 (-)
AMCG00016479 NA other upstream 299930 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 349563 20666142 ~ 20683024 (-)
G13962 NA other upstream 3138513 23455092 ~ 23455811 (-)
G13969 NA other upstream 3382570 23699149 ~ 23700255 (-)
AMCG00016504 NA other upstream 3524483 23841062 ~ 23862739 (-)

Expression


Co-expression Network