G13762


Basic Information

Item Value
gene id G13762
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20468246 ~ 20513404 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17050
aataataataataataataataataataataataataataataataataataataataatgacaacctGGAGTAAATGGTTTTGTGAATCTGCTCATCTGCTCTTGGCTTCCTATCTGGTCACATCAAAATTCATTACAGTCAGTAATGATTCCCTCAGGAATGGCCAGGAATTGCATTAGAGACCTTGGGGTGGCTTCAAATGGAAATTCACAACCCAGTGCGGAAAAGCAACATTTATAAACAGATTAATGTCtcgaaaataatataaatttgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattgtatccTTTGAAGTTTACAAACAAATTGTTCTGGTTCTCCAGGTTTGTAAGACAAGATGAGTAAGAACTGGTATATTTATCACAATACTAATTTTAGCTCTGTATTTTCAACTTTCAtatcaaattactttaaaacactTGATACATACAGATAGGCGAATTAATCAAAGTATGATTTTCCAGTCGGATCCACAGTGAAGGTGATGCAGTTTGAGTGTTGAGAGCCTTAATGAGCTTCAATCTTCAATGCATCTCAGACAGGCTGACAAACACAGCAGAGGGAATTAATGCACTGCAGGTAAAACATCTTCTACATCAAACACTGTGcatttcaaagacaaaacaaatggaTGAAATACAAACAGAGACAAATGTACTGAccgaagttttttttttctttggagaCAGTGAAACAGAATGTTAATGGTCCATTACACAGATTATTTATCTACAATtggttttgaatatatatatatatatatatatatatatgaataactgcatgtctttccctgcatgtctgtgtaaacaaggtcactgtctcacggtcttactgtgctatggtactgtgctatagttcaaccctgatagcCAGAAGAACaaggtctgataagaaccagttttcaccagcaatatGTGCTTGATAATaagccccccttatattaaacattatgtatgcctTAATTTTACCCCAGTTTCCTTCCTGCCCAGTTGTCATGCAGAAACTGAATTTCCACTTATCACGGGAATAAATATGtaggcctgttatctttctctcctgtctggtctgcataaaagtgcctgtactTCATAACTCTCCTAATACTGTGCTTGAGATTGCCTTTCCTGGACGTCTTCCGTGCAGCTGCTCGTAATAAATTCCTTTCGCTTGAACA

Function

GO: NA

KEGG:

id description
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU17050 True 1245 lncRNA 0.33 2 20468246 20513404

Neighbor

gene id symbol gene type direction distance location
AMCG00016471 NA coding downstream 21215 20441545 ~ 20447031 (-)
AMCG00016470 prdx4,prdx2 coding downstream 42496 20421954 ~ 20425750 (-)
AMCG00016472 sat1a.1,sat1,LOC107654323,LOC107734365,LOC107665519,LOC107591481,LOC107725087 coding downstream 62470 20401388 ~ 20405776 (-)
AMCG00016473 sat1a.2,sat1,LOC107562204,LOC107591482,LOC107725150,LOC107654323 coding downstream 69497 20393597 ~ 20398749 (-)
AMCG00016460 kif3a coding downstream 89114 20372554 ~ 20379132 (-)
AMCG00016476 NA coding upstream 4395 20517799 ~ 20523757 (-)
AMCG00016481 NA coding upstream 410576 20923980 ~ 20973210 (-)
AMCG00016483 NA coding upstream 473588 20986992 ~ 21012361 (-)
AMCG00016484 NA coding upstream 560690 21074094 ~ 21245418 (-)
AMCG00016485 igsf11 coding upstream 1175407 21688811 ~ 21709689 (-)
G13680 NA non-coding downstream 151667 20315742 ~ 20316579 (-)
G13615 NA non-coding downstream 463306 20003149 ~ 20004940 (-)
G13414 NA non-coding downstream 1209689 19258323 ~ 19258557 (-)
G13413 NA non-coding downstream 1211327 19256638 ~ 19256919 (-)
G13392 NA non-coding downstream 1214832 19165586 ~ 19253414 (-)
G13789 NA non-coding upstream 81925 20595329 ~ 20598765 (-)
G13806 NA non-coding upstream 133432 20646836 ~ 20652268 (-)
G13812 NA non-coding upstream 248019 20761423 ~ 20761693 (-)
G13819 NA non-coding upstream 394514 20907918 ~ 20908118 (-)
G13860 NA non-coding upstream 1268660 21782064 ~ 21782296 (-)
AMCG00016453 NA other downstream 332699 20128908 ~ 20135547 (-)
G13367 NA other downstream 1362865 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 2926904 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 3201499 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 3598244 16866318 ~ 16870002 (-)
AMCG00016479 NA other upstream 103105 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 152738 20666142 ~ 20683024 (-)
G13962 NA other upstream 2941688 23455092 ~ 23455811 (-)
G13969 NA other upstream 3185745 23699149 ~ 23700255 (-)
AMCG00016504 NA other upstream 3327658 23841062 ~ 23862739 (-)

Expression


Co-expression Network