G13892


Basic Information

Item Value
gene id G13892
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 22236171 ~ 22236399 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17213
ggtttggggtaataaaattgaaattcgaattgaagcagtctttgccattcctctcccttgattcctacagaatgtgtgttgggggtgtgatggctttgaggaatgtgaaaatggtccaaatgttacctagagtttctaattctctatattgtcaagttttagttctatcaattacattttcaagtccctcaaagcaggaccttacagttgataccaaacaagccaggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17213 True 229 lncRNA 0.39 1 22236171 22236399

Neighbor

gene id symbol gene type direction distance location
AMCG00016494 NA coding upstream 78901 22146673 ~ 22157270 (+)
AMCG00016491 NA coding upstream 179942 22045365 ~ 22056229 (+)
AMCG00016492 NA coding upstream 244748 21990406 ~ 21991423 (+)
AMCG00016495 NA coding upstream 301100 21934154 ~ 21935071 (+)
AMCG00016493 NA coding upstream 329810 21905382 ~ 21906361 (+)
AMCG00016496 NA coding downstream 90400 22326799 ~ 22327023 (+)
AMCG00016498 NA coding downstream 420261 22656660 ~ 22667322 (+)
AMCG00016499 NA coding downstream 742495 22978894 ~ 22984657 (+)
AMCG00016501 NA coding downstream 1416995 23653394 ~ 23716846 (+)
AMCG00016500 NA coding downstream 1492449 23728848 ~ 23751132 (+)
G13873 NA non-coding upstream 313710 21922153 ~ 21922461 (+)
G13799 NA non-coding upstream 1580556 20653670 ~ 20655615 (+)
G13798 NA non-coding upstream 1583899 20646835 ~ 20652272 (+)
G13791 NA non-coding upstream 1618474 20614745 ~ 20617697 (+)
G13700 prdx4,LOC107734341,LOC107665442,LOC107654298,LOC105904605 non-coding upstream 1810329 20424137 ~ 20425842 (+)
G13894 NA non-coding downstream 93664 22330063 ~ 22330299 (+)
G13902 NA non-coding downstream 241937 22478336 ~ 22478597 (+)
G13928 NA non-coding downstream 678397 22914796 ~ 22915056 (+)
G13938 NA non-coding downstream 773718 23010117 ~ 23010500 (+)
G13939 NA non-coding downstream 774247 23010646 ~ 23010869 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 404023 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 2356446 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 3762482 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 4636590 17562418 ~ 17599581 (+)
G13012 NA other upstream 5114239 17116793 ~ 17121932 (+)
AMCG00016502 NA other downstream 1629868 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 1701652 23938051 ~ 23945024 (+)
G14057 NA other downstream 1843618 24080017 ~ 24110182 (+)
AMCG00016537 NA other downstream 2243307 24479706 ~ 24561807 (+)
G14326 NA other downstream 2771563 25007962 ~ 25010687 (+)

Expression


Co-expression Network