G13894


Basic Information

Item Value
gene id G13894
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 22330063 ~ 22330299 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17215
cacttggtaggtccggtcgctgaggtaggaggagaaccaggtgagagcagtcccagagattccaaggtcagcgaggcagaagaggaggatggagtgatcgacagtgtcaaatgctgcggagaggtcaaggaggatgaggactgaggagagggaggccgcccgagcacagctgagggagtcagtgactgccaggagagccgtctcagtggagtgagctatgcggaagccggattgcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17215 True 237 lncRNA 0.46 1 22330063 22330299

Neighbor

gene id symbol gene type direction distance location
AMCG00016496 NA coding upstream 3040 22326799 ~ 22327023 (+)
AMCG00016494 NA coding upstream 172793 22146673 ~ 22157270 (+)
AMCG00016491 NA coding upstream 273834 22045365 ~ 22056229 (+)
AMCG00016492 NA coding upstream 338640 21990406 ~ 21991423 (+)
AMCG00016495 NA coding upstream 394992 21934154 ~ 21935071 (+)
AMCG00016498 NA coding downstream 326361 22656660 ~ 22667322 (+)
AMCG00016499 NA coding downstream 648595 22978894 ~ 22984657 (+)
AMCG00016501 NA coding downstream 1323095 23653394 ~ 23716846 (+)
AMCG00016500 NA coding downstream 1398549 23728848 ~ 23751132 (+)
AMCG00016503 NA coding downstream 1437837 23768136 ~ 23815510 (+)
G13892 NA non-coding upstream 93664 22236171 ~ 22236399 (+)
G13873 NA non-coding upstream 407602 21922153 ~ 21922461 (+)
G13799 NA non-coding upstream 1674448 20653670 ~ 20655615 (+)
G13798 NA non-coding upstream 1677791 20646835 ~ 20652272 (+)
G13791 NA non-coding upstream 1712366 20614745 ~ 20617697 (+)
G13902 NA non-coding downstream 148037 22478336 ~ 22478597 (+)
G13928 NA non-coding downstream 584497 22914796 ~ 22915056 (+)
G13938 NA non-coding downstream 679818 23010117 ~ 23010500 (+)
G13939 NA non-coding downstream 680347 23010646 ~ 23010869 (+)
G13943 NA non-coding downstream 781627 23111926 ~ 23112165 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 497915 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 2450338 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 3856374 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 4730482 17562418 ~ 17599581 (+)
G13012 NA other upstream 5208131 17116793 ~ 17121932 (+)
AMCG00016502 NA other downstream 1535968 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 1607752 23938051 ~ 23945024 (+)
G14057 NA other downstream 1749718 24080017 ~ 24110182 (+)
AMCG00016537 NA other downstream 2149407 24479706 ~ 24561807 (+)
G14326 NA other downstream 2677663 25007962 ~ 25010687 (+)

Expression


Co-expression Network