G13928


Basic Information

Item Value
gene id G13928
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 22914796 ~ 22915056 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17250
CTCATGAATCTGTCAttactaactctacctcctctccactctccttcctccagagccactccttctcatccctggcccctaaatggtggaacaacctgcccaccgaagtcaaaacagcagagtccttgacctcattccggcgcttactcaagacgcatcttttccgacagtacttgtaatattagtcctctatccctgctagatagcacttcacagtttttattatgcttctcgcgttcttgattgttttcctccttgctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17250 True 261 lncRNA 0.42 1 22914796 22915056

Neighbor

gene id symbol gene type direction distance location
AMCG00016498 NA coding upstream 247474 22656660 ~ 22667322 (+)
AMCG00016496 NA coding upstream 587773 22326799 ~ 22327023 (+)
AMCG00016494 NA coding upstream 757526 22146673 ~ 22157270 (+)
AMCG00016491 NA coding upstream 858567 22045365 ~ 22056229 (+)
AMCG00016492 NA coding upstream 923373 21990406 ~ 21991423 (+)
AMCG00016499 NA coding downstream 63838 22978894 ~ 22984657 (+)
AMCG00016501 NA coding downstream 738338 23653394 ~ 23716846 (+)
AMCG00016500 NA coding downstream 813792 23728848 ~ 23751132 (+)
AMCG00016503 NA coding downstream 853080 23768136 ~ 23815510 (+)
AMCG00016509 NA coding downstream 988948 23904004 ~ 23913433 (+)
G13902 NA non-coding upstream 436199 22478336 ~ 22478597 (+)
G13894 NA non-coding upstream 584497 22330063 ~ 22330299 (+)
G13892 NA non-coding upstream 678397 22236171 ~ 22236399 (+)
G13873 NA non-coding upstream 992335 21922153 ~ 21922461 (+)
G13799 NA non-coding upstream 2259181 20653670 ~ 20655615 (+)
G13938 NA non-coding downstream 95061 23010117 ~ 23010500 (+)
G13939 NA non-coding downstream 95590 23010646 ~ 23010869 (+)
G13943 NA non-coding downstream 196870 23111926 ~ 23112165 (+)
G13949 NA non-coding downstream 410504 23325560 ~ 23325760 (+)
G13953 NA non-coding downstream 432371 23347427 ~ 23347712 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 1082648 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 3035071 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 4441107 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 5315215 17562418 ~ 17599581 (+)
G13012 NA other upstream 5792864 17116793 ~ 17121932 (+)
AMCG00016502 NA other downstream 951211 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 1022995 23938051 ~ 23945024 (+)
G14057 NA other downstream 1164961 24080017 ~ 24110182 (+)
AMCG00016537 NA other downstream 1564650 24479706 ~ 24561807 (+)
G14326 NA other downstream 2092906 25007962 ~ 25010687 (+)

Expression


Co-expression Network