G13943


Basic Information

Item Value
gene id G13943
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 23111926 ~ 23112165 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17267
cttgcatggagccccagatcgagggagactgacagttattttgtgtttcttccatttgcgaataatcgcaccaactgttctcaccttctcaccaagctgcttggtgatggtcttgtagcccattccagccttgtgtagatctacaatcttgtccctgacatcctgggacagctctttggtcttgaccatggtggagagtttggaatctgattgattgattgcttctgtggacaggtgtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17267 True 240 lncRNA 0.47 1 23111926 23112165

Neighbor

gene id symbol gene type direction distance location
AMCG00016499 NA coding upstream 127269 22978894 ~ 22984657 (+)
AMCG00016498 NA coding upstream 444604 22656660 ~ 22667322 (+)
AMCG00016496 NA coding upstream 784903 22326799 ~ 22327023 (+)
AMCG00016494 NA coding upstream 954656 22146673 ~ 22157270 (+)
AMCG00016491 NA coding upstream 1055697 22045365 ~ 22056229 (+)
AMCG00016501 NA coding downstream 541229 23653394 ~ 23716846 (+)
AMCG00016500 NA coding downstream 616683 23728848 ~ 23751132 (+)
AMCG00016503 NA coding downstream 655971 23768136 ~ 23815510 (+)
AMCG00016509 NA coding downstream 791839 23904004 ~ 23913433 (+)
AMCG00016507 ccdc58,LOC107733097 coding downstream 813626 23925791 ~ 23934450 (+)
G13939 NA non-coding upstream 101057 23010646 ~ 23010869 (+)
G13938 NA non-coding upstream 101426 23010117 ~ 23010500 (+)
G13928 NA non-coding upstream 196870 22914796 ~ 22915056 (+)
G13902 NA non-coding upstream 633329 22478336 ~ 22478597 (+)
G13894 NA non-coding upstream 781627 22330063 ~ 22330299 (+)
G13949 NA non-coding downstream 213395 23325560 ~ 23325760 (+)
G13953 NA non-coding downstream 235262 23347427 ~ 23347712 (+)
G13979 lipt2 non-coding downstream 750050 23862215 ~ 23865800 (+)
G14132 NA non-coding downstream 1205635 24317800 ~ 24321319 (+)
G14136 NA non-coding downstream 1224805 24336970 ~ 24338848 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 1279778 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 3232201 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 4638237 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 5512345 17562418 ~ 17599581 (+)
G13012 NA other upstream 5989994 17116793 ~ 17121932 (+)
AMCG00016502 NA other downstream 754102 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 825886 23938051 ~ 23945024 (+)
G14057 NA other downstream 967852 24080017 ~ 24110182 (+)
AMCG00016537 NA other downstream 1367541 24479706 ~ 24561807 (+)
G14326 NA other downstream 1895797 25007962 ~ 25010687 (+)

Expression


Co-expression Network