G13949


Basic Information

Item Value
gene id G13949
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 23325560 ~ 23325760 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17273
GatgtgttttacagaagactgaacaaACCATGGCTGAAGCCGGCGCTAATCAAGGCGCTATCTTACTCCCATCTGCGGGCCACCCCCGGGCAAGTCCAGAAAATCATAGATGAGATTTTGCTGGAGCTGAAAAATGAGCCGTATATAAAAGAGAAACTTGATCAGCTGATCAATGACCTGGATGAGCCGAGTAGAAAAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17273 True 201 lncRNA 0.46 1 23325560 23325760

Neighbor

gene id symbol gene type direction distance location
AMCG00016499 NA coding upstream 340903 22978894 ~ 22984657 (+)
AMCG00016498 NA coding upstream 658238 22656660 ~ 22667322 (+)
AMCG00016496 NA coding upstream 998537 22326799 ~ 22327023 (+)
AMCG00016494 NA coding upstream 1168290 22146673 ~ 22157270 (+)
AMCG00016491 NA coding upstream 1269331 22045365 ~ 22056229 (+)
AMCG00016501 NA coding downstream 327634 23653394 ~ 23716846 (+)
AMCG00016500 NA coding downstream 403088 23728848 ~ 23751132 (+)
AMCG00016503 NA coding downstream 442376 23768136 ~ 23815510 (+)
AMCG00016509 NA coding downstream 578244 23904004 ~ 23913433 (+)
AMCG00016507 ccdc58,LOC107733097 coding downstream 600031 23925791 ~ 23934450 (+)
G13943 NA non-coding upstream 213395 23111926 ~ 23112165 (+)
G13939 NA non-coding upstream 314691 23010646 ~ 23010869 (+)
G13938 NA non-coding upstream 315060 23010117 ~ 23010500 (+)
G13928 NA non-coding upstream 410504 22914796 ~ 22915056 (+)
G13902 NA non-coding upstream 846963 22478336 ~ 22478597 (+)
G13953 NA non-coding downstream 21667 23347427 ~ 23347712 (+)
G13979 lipt2 non-coding downstream 536455 23862215 ~ 23865800 (+)
G14132 NA non-coding downstream 992040 24317800 ~ 24321319 (+)
G14136 NA non-coding downstream 1011210 24336970 ~ 24338848 (+)
G14127 eif1ax,EIF1AX,eif1axb,LOC105905255,LOC106563585,LOC106590461,LOC108411992 non-coding downstream 1044566 24370326 ~ 24375827 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 1493412 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 3445835 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 4851871 18419017 ~ 18473689 (+)
AMCG00016379 cwf19l2,LOC107560834,LOC107670086,LOC107728743,LOC107566889,LOC107669872 other upstream 5725979 17562418 ~ 17599581 (+)
G13012 NA other upstream 6203628 17116793 ~ 17121932 (+)
AMCG00016502 NA other downstream 540507 23866267 ~ 23882946 (+)
AMCG00016506 NA other downstream 612291 23938051 ~ 23945024 (+)
G14057 NA other downstream 754257 24080017 ~ 24110182 (+)
AMCG00016537 NA other downstream 1153946 24479706 ~ 24561807 (+)
G14326 NA other downstream 1682202 25007962 ~ 25010687 (+)

Expression


Co-expression Network