G13962



Basic Information


Item Value
gene id G13962
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 23455092 ~ 23455811 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU17287
atctatattaatgatctggactctgggatagttagcaaacttgtcaaatttgcagatgatactaaaataggtggctcagcagatacaatcttggcagcacaggctattcagagggacttagataatattcagttgtgggctgacacctggcaaatgaaattcaatgtggacaagtgcaaggtaatacatgcaggtaacaaaaatgtccactataattacactatgggaggtacagatctagatgaagtaacgcgtgagaaagaccactttctccatccaagcaatgtggggaagcaataaaaaaggcaaacagaatgctagagtatattgtgaaaagtgtagaatttaaaacaaggaaagtaatgttaagactgtacaatgcgctagttagacctcatctggaatactgtgtacagttctgggcaccacacttcaagaaggatattgctgctttagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaaagtcctactcggagagactgagggaactgaaccttttcaccctggaacagaggagacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaaaacggaaaacaggagacacttcttcacacagagtagtcacaatctggaataaactacccagcgatgtggttgaagctgaaagtttgggaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU17287 True 698 TUCP 0.30 2 23455092 23455811

Neighbor


gene id symbol gene type direction distance location
AMCG00016497 NA coding downstream 1369750 22077617 ~ 22085342 (-)
AMCG00016487 NA coding downstream 1434361 22017124 ~ 22020731 (-)
AMCG00016488 NA coding downstream 1502899 21949268 ~ 21952193 (-)
AMCG00016486 NA coding downstream 1533453 21910870 ~ 21921639 (-)
AMCG00016485 igsf11 coding downstream 1745403 21688811 ~ 21709689 (-)
AMCG00016512 NA coding upstream 437612 23893423 ~ 23902805 (-)
AMCG00016510 NA coding upstream 461132 23916943 ~ 23925716 (-)
AMCG00016514 NA coding upstream 472080 23927891 ~ 23931580 (-)
AMCG00016513 NA coding upstream 479092 23934903 ~ 23937234 (-)
AMCG00016511 NA coding upstream 489383 23945194 ~ 23951329 (-)
G13957 NA non-coding downstream 96278 23358371 ~ 23358814 (-)
G13956 NA non-coding downstream 97400 23357461 ~ 23357692 (-)
G13954 NA non-coding downstream 107380 23347440 ~ 23347712 (-)
G13952 NA non-coding downstream 107741 23347006 ~ 23347351 (-)
G13942 NA non-coding downstream 361256 23092287 ~ 23093836 (-)
G13990 NA non-coding upstream 425148 23880959 ~ 23882959 (-)
G14012 NA non-coding upstream 477198 23933009 ~ 23933843 (-)
G14013 NA non-coding upstream 478355 23934166 ~ 23934467 (-)
G14015 NA non-coding upstream 485507 23941318 ~ 23941538 (-)
G14016 NA non-coding upstream 486233 23942044 ~ 23943378 (-)
AMCG00016480 NA other downstream 2772068 20666142 ~ 20683024 (-)
AMCG00016479 NA other downstream 2818132 20616509 ~ 20636960 (-)
AMCG00016453 NA other downstream 3319545 20128908 ~ 20135547 (-)
G13367 NA other downstream 4349711 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 5913750 17538034 ~ 17541342 (-)
G13969 NA other upstream 243338 23699149 ~ 23700255 (-)
AMCG00016504 NA other upstream 385251 23841062 ~ 23862739 (-)
AMCG00016505 NA other upstream 408770 23864581 ~ 23885258 (-)
AMCG00016531 NA other upstream 853445 24309256 ~ 24323458 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other upstream 1097881 24553692 ~ 24566956 (-)

Expression



Co-expression Network