G14057


Basic Information

Item Value
gene id G14057
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24080017 ~ 24110182 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17414
aacaaacacagcagctcACTCATTGGAATCATTTTTCAACAGTTTATTCTTTGGGACTGAAACAATTTATCACATGGATACCACTGGAATATGACATGAACATGTGCACGGCCCTgtgcacccacacacacagcaaacacgAGTGACtaaagagaggaagaaaatcagaaaaacaaccaacaaaatacttaaaattaaaaaaaaacatcaacaccTGAAATACAGAACCACAGTCAGGCTTCAGCCACCTGCctgcaataaatacagaacTGTTTCATCCCTTGCTTTCAAACTCCACACTTCCTAGTTTAGAAGTctgattttcttcttttaaatataattatttcttttgtttgtagGGAACATTAACAACAAGTACATCcatttgtattggttttctttttttgtgtatttttttaaacattttatttaggtCTACAGCTACAGCTATGAGATGAaatgagatgagatgagatgagatgGCTACCTGGTAGAAAGGGAAACGGGTGGAAATGTCttgagtgggggggggggggcgcttGCGGTGGGTTAGTTGCAGAGACACGGCAGCGGTGCTTTAACAGCTTGGGAATGTTGTCAGGGTGGCAGCTGAGCGTGAAGATGGAGGTGGAGGTAGGCACCGATGGGCTCGGTTGCTTCTTAGACAGGTGGCTGTAGATGCCAGAGTCGGTGCCAAAATGATGCAGATGTTAACcgggcctttttttttttaggagaaCCATCACCCTGCAGGACAGGGGTTGGGCTCGGAGGATCCAgcccctgcagcagcagctcttAGGGAGCCCAGTGTTAGAGAACTGCACCTGCTGCTCTCTCATGCACATGCTGACattctcactcactcacacgtgcacacatgcatgcacacattcaaatgtgcagtcacacacatgcatgcactcTTGAACATGCTCGCTCACACTTGCATGCATgtacacactcactcattcacacacacacacaagcgcACACGTGTGCAACTCCCCGCTTCGTCATTTGAACGTTTTACTGCTGGAGACTCCTTTTAATTGAATAGTTTGTGCGAAACAATAGcagtcttgtgtttttttttggtttttttttaaactgatttgaACGTCAGCGTTTGTGTACCAAGGCATAGAGAGgaaatgaaaagatgaaaaCTACAAGGGGGGAACACCGCCATCCAGTCTGTTTTATCAGTGCAGCTCAGTCTTATAGATCTTGGAGAGGAGCGTGCAGACAGGCCTGAACCAACACTGTGCTGATGATCCTCGTCCCCTCCTGAATGGATGCTTTCTCACAGGGTTGGGAGGTCATGGTCCTTCTGCGTTGGGGTTTTGGGGTTCAGATTTCTAGTGGGGCTGTAGTGTGACCCCTCCCCTTGCTGCTGACCAGCCCCctttcccttgttttttttctttcttccttccttccttccttccatcCATGCTGCAAAGGTCTAGGAAGCTGTGGGTGAGAATTCCTCTGGAGCATAACGGTTAGGCAGTGAATGGTTCGTACTGAGGTCCCTGGTGTGCTGGGGCGCTGTGCCACATGGTTTAGGCTGCTGGGCGGCACCAGGTACGGCTCGCTGGCCCTGCTGTGGAAACTGGCTGGCCCAGGAGCTGTGTGCTGGAGGCTCAAACCCTGTACTATTTAAACACTCTGCAGAGGACACAAGCACCCTGTACAATCCAGCTTGGTGATGTTCCCCTCCCATTATAATTAAAGCATGATgggtttttttcttgtttttttttcttcattctttctttttctttgaagAATTTTATCTTTTCTGGAGCTCTATATTATAAGACTTTTTAACTTCTGAATAAAAAGGATACTATTTGCATTAACTGATGGTCTCTGCAGTGGTGTGCTTGTATATCTTCTGTCTTGTGTAactgaatatgaaaatataacgCAAGCT
>TU17415
aacaaacacagcagctcACTCATTGGAATCATTTTTCAACAGTTTATTCTTTGGGACTGAAACAATTTATCACATGGATACCACTGGAATATGACATGAACATGTGCACGGCCCTgtgcacccacacacacagcaaacacgAGTGACtaaagagaggaagaaaatcagaaaaacaaccaacaaaatacttaaaattaaaaaaaaacatcaacaccTGAAATACAGAACCACAGTCAGGCTTCAGCCACCTGCctgcaataaatacagaacTGTTTCATCCCTTGCTTTCAAACTCCACACTTCCTAGTTTAGAAGTctgattttcttcttttaaatataattatttcttttgtttgtagGGAACATTAACAACAAGTACATCcatttgtattggttttctttttttgtgtatttttttaaacattttatttaggtCTACAGCTACAGCTATGAGATGAaatgagatgagatgagatgagatgGCTACCTGGTAGAAAGGGAAACGGGTGGAAATGTCttgagtggggtgggggtggcaggGGATCAGTGGGCCCTCTGTTTTGCAATGCAGGGGTTTGGGTGAGCAGAGGCTTCCCTGTGCTGAAAGACTGAGTGAAATGCCTGGGCTGCTGAGTGGACAGGGGTTGGAGAGATGGCGTGTGTTGGGAGGGGGGTCTACATGTCGCTGGAGCTCACGAAAGCACAGGAGCAACAGACCACCTCTGCAGTCCAGTCAGCCGTGCCCTAGTCAGATCGGTCTAGATTGTATTGTCATGTGTCTCAACTGGCCACTGTTCCCAACCCCACTCCCTCCCCAACAATCCCCCCTGCCTTTTGTGCAGCTGAATCAGACTTGTATATCAGCTGCTAACATGAAACATCCATTCAGTCTGATTCACAGTTTGGCTCTCAGTTACATCCCAGCCTTCCAGGCTAACCTGCAGTACAGCAGCCCACCTCCCCATTAGGCAGGGAACAGTGCCCAACACCCCCGACGGCAGGGCCACAGGGAACCGAAACCTGAACcgcgctgctgctgccgccTCAACTTCTCCGTCTCTACTCTGCTGGTggcatttctaaaaaaaaaatatatatatatatatatatatatatatatatatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17414 True 1942 lncRNA 0.45 2 24080017 24103017
TU17415 False 1125 TUCP 0.45 2 24080017 24110182

Neighbor

gene id symbol gene type direction distance location
AMCG00016515 NA coding upstream 2731 24073722 ~ 24077286 (+)
AMCG00016516 NA coding upstream 50061 24022414 ~ 24029956 (+)
AMCG00016508 NA coding upstream 107176 23959304 ~ 23972841 (+)
AMCG00016507 ccdc58,LOC107733097 coding upstream 145567 23925791 ~ 23934450 (+)
AMCG00016509 NA coding upstream 166584 23904004 ~ 23913433 (+)
AMCG00016529 NA coding downstream 214768 24324950 ~ 24336827 (+)
AMCG00016536 NA coding downstream 458946 24569128 ~ 24580184 (+)
AMCG00016541 sms,LOC106603082,LOC107700049 coding downstream 471795 24581977 ~ 24597847 (+)
AMCG00016542 LOC107663624 coding downstream 491518 24601700 ~ 24617531 (+)
AMCG00016540 NA coding downstream 559030 24669212 ~ 24683200 (+)
G13979 lipt2 non-coding upstream 214217 23862215 ~ 23865800 (+)
G13953 NA non-coding upstream 732305 23347427 ~ 23347712 (+)
G13949 NA non-coding upstream 754257 23325560 ~ 23325760 (+)
G13943 NA non-coding upstream 967852 23111926 ~ 23112165 (+)
G13939 NA non-coding upstream 1069148 23010646 ~ 23010869 (+)
G14132 NA non-coding downstream 207618 24317800 ~ 24321319 (+)
G14136 NA non-coding downstream 226788 24336970 ~ 24338848 (+)
G14127 eif1ax,EIF1AX,eif1axb,LOC105905255,LOC106563585,LOC106590461,LOC108411992 non-coding downstream 260144 24370326 ~ 24375827 (+)
G14177 NA non-coding downstream 309176 24419358 ~ 24419607 (+)
G14354 NA non-coding downstream 1011901 25122083 ~ 25122392 (+)
AMCG00016506 NA other upstream 134993 23938051 ~ 23945024 (+)
AMCG00016502 NA other upstream 197071 23866267 ~ 23882946 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 2247869 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 4200292 19875056 ~ 19879725 (+)
AMCG00016407 NA other upstream 5606328 18419017 ~ 18473689 (+)
AMCG00016537 NA other downstream 369524 24479706 ~ 24561807 (+)
G14326 NA other downstream 897780 25007962 ~ 25010687 (+)
AMCG00016558 rpl21,LOC107591224 other downstream 970492 25080674 ~ 25085097 (+)
G14361 NA other downstream 1023016 25133198 ~ 25133879 (+)
AMCG00016566 NA other downstream 1040166 25150348 ~ 25157461 (+)

Expression


Co-expression Network