G14132


Basic Information

Item Value
gene id G14132
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24317800 ~ 24321319 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17505
TTCTGTTCAAAAGGAGACTTTATATCCcagcaaatgaaaatgtgaaattgcaGAGCTGTTTGAAGTGTTTGAAGAGCTCATTCCCACTCCCAGGCTCTTGGATGTTTGCCCTGTAGAGGGAGTCATGCGCACTTCCATACAGAAGGCATGCGATCCAACGCTTGACCACTTTCCAGGCAGCAAAAGCGGAAGTCGTTTCAGTTTTCGCACGTTAAGCATGTGGAAAGGGTCTCGGTGGTGGATGTTTTCCGGTGGGCTGGAGTCGTCACATACCCAGATGCACATTCATACAGAAGGCAGAACAAATTTCTGTGCATTTCTCCagtacaaaaatatttgttagaTGCCAAGTTATTCCGGTTGGTGCTTTTCTAATGCAATTCCAACACATGCAGACGGCACGTTTTCATTGAAGCAGTCTGGACAACCTGCCAGACGCACTCCCAACTATGTCCTCATCTCCTGGAGCTcttggggggaaaataaatcctaataaatgagaacaataataatgatgatgatgttcTAATCCCTTCACATCCAAGAAGGACAATGGCAGTGTGACGATTtccagggagaaaaaaaataagaaaaatgaaaattgctGGATAACACCTCCTATCGATGAGCTGCTTGCATCTAAGAGAGCATCAGCCTCCTCTATGACTCCATGCCCCATGTGTCATTCCTTCCACAACACCCTGATCTGGGTGTGAGTCGTGCATTTACAGCAGGGCCTCACTTTAAGGTGAACTACAACAAGTCCTTCACAGCGCTGATCCAGAAAGTGGTGTCACACATGGGAAGGAAGCCAGGGTCCTGTCCAGAAGATTTCCTGCATTGCCAAATAGTGGTgcgttttttgtttggttttccaaGCTTTAGATGGATTCCTGCACATCCCACAACCCTCAAACAGGGATAAGAGTTCCTGTTGAGCAGTATTAATTCTGTCAAGATCAATCAGCTCCTCAGAAATATGCTGTATCCATCTCCGCTTGAAACTGGGCAGGCTGGTTCAAAGAGTTGCCCAGAAAGTGCAGGGAAGGAGAGGAGCTATGGCTTCATGAGCTTTGCTATCCAATGCTCTGAGGGGTCCGAGTTAGGTTAGGTGTGTAATGATATCCAGGCTTCAGCAGGTAATTTGAATTGGTGTGGGTGGATTTCAGAGTGACAGGAAAAGAAACCACTGgggacgcacacacacaggggacGCAAATGGAAATGGTAAAAGGGgatgaaagaacaaaaataaaaaatatggatataatttagaaaaaagCTCTCCTGGAGAAATTCCTGTTCCTCCTGATTTGCAGTCCACAGACGGATGCTGTGCATGACTCGAGGGAAGAAATCTTGGCGTCCCGTCCGTGAACAGGCTTGGAGGTTCATTAGCACCCTCCTCTGTCGCACAGCTGTACTTGTAGTCTCCCAGTTGGGAACGAGCAAAGCAACTCGGGTAAAGAAAAGAACTTGCTTGAACTTCTAAAACCAGCCTCATTAAACTTGCGCGTGGGGgttaggggggggggaagaggtAGAAATGCCTTAAATTGAGATACCGTACCTGTACCGTGTCATGGAGTGCCGCGTGTCCACTTTGATCGTTAACGTTTCCGTTTGTGCCGCCCCTTCGTCTGTTGTGGAGCTGCCAGTGAGAGGAAGCTTGTGGTGAGGTTTCCTCTGGTTCTTCTTCCCAGTGGTCTTCCCCTGCGGTGGCGGCGGCGCTTTAGACAGGGCTGCTGTACTCCTCAGCTTGTTCACCACCTTCTGCTTGGCAACAGACAGTCGCAAGGAGGCCACGTCTTTCCCGGGCAGCTTGCTGTGCTTCTTGAGCACCTTCTCCGGCTCCCTGTGCTGCGGTGGCGAGGCCTTTGTCCCTCCCACCAGAACCGGCCTCTTCTTCCTCCCCTTCAGCTGGGCCTCGTCCCTGCTGTGAGAGGACGCCGAGCTGCCTTCCGTCTCCCTGCTCCCGAATGACTTGGGCTTCTGAAAGCGATCTGGCATATCCCCCCGCGGGTACTTGAGACTGCGTCCAATCTGGGCATTGGccgagcaggaggaggaggaggaggaggaggaggaggagcggcCTTCACGGCCGCGGCACTTCAGTGGGCGATGGACTTCCCTCCTGGCGTCTCCGGCCCTCTCCTGGTGGTATCTGGGTGAAGAGGGGTCGGCTTTCCATTTCGGGGACCAGTACTGGTGTGTCGCCTCGCCCCACTCtgcatttctattttctgtCGTCTCGCTGTGCTTTCTTAGCTCCCGTTCTGCAGAATACCTGTGTATCCACCATAGACAACAACAAAGATTTGATTACAACTGCAGCAAAAGCCTTTTGCTGGGAGTGCAGGATGTTAGCTTATTTCAGCAAGGTTGAAAGAATGCATTTTTCCCCACATGCCAGACTTTGCTTGGTTTAGATAGGCAGGCCCTTCAGAATTTATCAGTTgactttaatcattaaaaaaaaaaaaaaaaacctccccAGAATGAAAGGTGGTTAAGGCACACAATACACAAAGGTAGGTTAACTGCTCTGCAAATTTTTACacttcaaacacacagaaagaatGACTTTCAATCTGTGATCCTCTGCTGTGTGGCTTAGCCTTTTACCCCACTTTACCCAGGCTGAGCAGGCCGACCCAGGTGCTTCTCCGTATAAGAGATCCTTCCTGGAAATCCTTCCGAAACTCTGGGAGGAGAAAATGAATACCTCCTCTCTCGGGAGTGCCGTGGGCTGAGGTGCAACCCCCCGTTCCACCTCTCCTCCCGGGCCGAGCGATCGAAGGAGTGTGCTCTGGGCCGCTCTCTGCCGGCCCTGGGGCTGCGGCTCCTGCCCCGTGGGGCTCTGTCCGGGCAGTTGCTCCTCTGGTGGTCAGCGGGGGGGCCGGGGCGCCACCGGCCCCCGTCCCGCTCGGGGGAGTGGGCCCTCCTGTGGGCCACAAAGCCGTGGAGAGGTGCTGGGGATGGGGGCCTCCGGTTGCCGGGGGGGCCGTGGAAGTGTCTTGGAGAGGAGGGACGCTGGGTCCGGTTGAAGTTGGGCCCGTGGAACGCGCCTCTGGGTGAGGGCCTCCTGTGAGGAGCAGGTCCATGCGCTGGCCCTGAGGGGGACAGCCTGCgcggtggtggtggggggtgtgcTGGCCTGGGGGGTGAGAGTCTCCGGTGGCTGTGATAAGGCCCTGGTGAGTGGTGCCGGGGCTGGGGGGGGTATCCGTGATACGAGCCCGACTGCACCCTCCACGGGGGGGTGGGCCGATGGAACGGCTCTGCGGGAGCCCTGCGCTCATCCGGCAACATGGGCCTGGCAGCGCTCTTCTCGTAGTGGGAGCCGGGGGCGGGGCCGCTGCCCTTGGGATCTCTCCAGCGGACAGGCCTTCCAGGTTGGGCTCTGTAGTCACGAGACTCCGACCCGCAGGGACCCACGAACGGCATTCCCTCCTGGAGCTCCGGGGCACTTCCGTATGAGCTGGAGTAGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17505 True 3496 lncRNA 0.55 2 24317800 24321319

Neighbor

gene id symbol gene type direction distance location
AMCG00016519 NA coding upstream 199427 24104905 ~ 24118373 (+)
AMCG00016520 naa50,LOC107732992,LOC106590472,LOC106579447 coding upstream 216235 24089830 ~ 24101565 (+)
AMCG00016515 NA coding upstream 240514 24073722 ~ 24077286 (+)
AMCG00016516 NA coding upstream 287844 24022414 ~ 24029956 (+)
AMCG00016508 NA coding upstream 344959 23959304 ~ 23972841 (+)
AMCG00016529 NA coding downstream 3631 24324950 ~ 24336827 (+)
AMCG00016536 NA coding downstream 247809 24569128 ~ 24580184 (+)
AMCG00016541 sms,LOC106603082,LOC107700049 coding downstream 260658 24581977 ~ 24597847 (+)
AMCG00016542 LOC107663624 coding downstream 280381 24601700 ~ 24617531 (+)
AMCG00016540 NA coding downstream 347893 24669212 ~ 24683200 (+)
G13979 lipt2 non-coding upstream 452000 23862215 ~ 23865800 (+)
G13953 NA non-coding upstream 970088 23347427 ~ 23347712 (+)
G13949 NA non-coding upstream 992040 23325560 ~ 23325760 (+)
G13943 NA non-coding upstream 1205635 23111926 ~ 23112165 (+)
G13939 NA non-coding upstream 1306931 23010646 ~ 23010869 (+)
G14136 NA non-coding downstream 15651 24336970 ~ 24338848 (+)
G14127 eif1ax,EIF1AX,eif1axb,LOC105905255,LOC106563585,LOC106590461,LOC108411992 non-coding downstream 49007 24370326 ~ 24375827 (+)
G14177 NA non-coding downstream 98039 24419358 ~ 24419607 (+)
G14354 NA non-coding downstream 800764 25122083 ~ 25122392 (+)
G14363 NA non-coding downstream 823263 25144582 ~ 25144782 (+)
G14057 NA other upstream 207618 24080017 ~ 24110182 (+)
AMCG00016506 NA other upstream 372776 23938051 ~ 23945024 (+)
AMCG00016502 NA other upstream 434854 23866267 ~ 23882946 (+)
AMCG00016490 atg16l2,LOC107677090,LOC107746253,LOC106613341,LOC107730987 other upstream 2485652 21782106 ~ 21832148 (+)
AMCG00016429 lamtor1,LOC106581407 other upstream 4438075 19875056 ~ 19879725 (+)
AMCG00016537 NA other downstream 158387 24479706 ~ 24561807 (+)
G14326 NA other downstream 686643 25007962 ~ 25010687 (+)
AMCG00016558 rpl21,LOC107591224 other downstream 759355 25080674 ~ 25085097 (+)
G14361 NA other downstream 811879 25133198 ~ 25133879 (+)
AMCG00016566 NA other downstream 829029 25150348 ~ 25157461 (+)

Expression


Co-expression Network