G14311


Basic Information

Item Value
gene id G14311
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 24905121 ~ 24906546 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17733
TTCTTTAATCGATttattgtcaatttaaattacatgaaaCATGACAGACAGCTTGAGACAAAACTTGTGTTAAATTCTATGTTCTACTActgtattacatgttttaattgttcagTGATTCAGGAGGTTTTTGGAAGCTGAAATTGTGCCAAAACTGAGTTACAAACAATCTCGTTATATGCTTGTTTAAAGGCACACCTTAGCTATGCATCAACAAGCACAGGGTTAATACAGTCACACTCGTCTACACAAACAGTGTCTACCAGATCTGACAAGACATCCGCATTTGGATTGGGATTTTTGTTCCATGAAAACTATTTTAAGGGGGaattaaaaccaataaaataaaatccacccCCCCTCAGTTTAGGATTCTGTAAATCGATCCTGGTCTCAGTACTGTTCATCTTCAAACACACAGAGGCACAACGGTCTGGTGGACACTGTATAGCTATTTGGCCTTGACACTGAATTTAATCTAAAATTGGATTCTGTATTTTGAAGAAACCCCCTGTTGGAAGAAggcattgaaaaataattaaaattaaattaaaacatctatGCCAGTGGGAgtcttttgtttcttaaaaaagaaaagatgactGTACTAAACGGTCTATGAAAACCTGAGCctccaattaaattaaaccctgTACATACTTCTCTTCCCCTTTCAGCACTCTAGAAaaactgcaacaacaaaaCTTTGTGCATTTTTTCTGACATGAAACGGAATCTAAAACTATAAAATCGGACTTCGCTGCCATGAACGGTACAGCTGGGGAAACGCAGCAGAAACCACACAGACGGCAAGGGCCTCCACTCTCCTGGCATCAGATACCAGTGCAAACAGCACAACACATTGCATCCCATACACAGAGCTCACCCGACACGCCCTGCCCACACTGGGGAATGAAGACCGGCGCCTGCTACACCCTGCCCACACCGGGGAATGAGAAGACTCGCACGCTGTAGAGACTTTGCATctccattaaaaatataaaaactaaatttacataaaatacctCTGCCTGGTCACTACGCTTTTCTGTATGTACACTAAGGTAAGGATTCAAAGGCATTTAAACCTCACGAGTCACTGTACAGATGCATAACTATTAAACCCATAGTACATTGTGGCTCAGTAGTATCTTAGTCTTGACATACAGACTCGAGTACTGGAGGCTAGATACTGCTAGATCTCAGAGCCCAGCACTGCTCTGACCTGCGGAGCCAAGGGCACTTCCAGGCCCTTGAGAAATGACACTTGATTTCCATATGGAGGAGCGATCAGAGTGGAGCCACTCACAGGGAACCGATGAGCTGAAAAGGCTCATTCAAAAAACACTGCGGTTTCATCTGACCAACCATTGCTTCCCCATCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17733 True 1385 lncRNA 0.44 2 24905121 24906546

Neighbor

gene id symbol gene type direction distance location
AMCG00016555 mtmr6,LOC104951663 coding downstream 10702 24883903 ~ 24894419 (-)
AMCG00016552 NA coding downstream 26894 24875864 ~ 24878227 (-)
AMCG00016551 NA coding downstream 95209 24802736 ~ 24809912 (-)
AMCG00016550 NA coding downstream 104927 24790148 ~ 24800194 (-)
AMCG00016545 NA coding downstream 118711 24762569 ~ 24786410 (-)
AMCG00016556 NA coding upstream 24271 24930817 ~ 24953633 (-)
AMCG00016564 LOC107584968 coding upstream 66501 24973047 ~ 25001455 (-)
AMCG00016565 NA coding upstream 150014 25056560 ~ 25057570 (-)
AMCG00016563 usp12,usp12a,LOC107705210,LOC107591222,LOC107584971 coding upstream 166624 25073170 ~ 25080493 (-)
AMCG00016570 NA coding upstream 199786 25106332 ~ 25107565 (-)
G14245 NA non-coding downstream 124855 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 220586 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 286776 24615787 ~ 24618345 (-)
G14214 NA non-coding downstream 298800 24606108 ~ 24606321 (-)
G14213 NA non-coding downstream 303114 24601698 ~ 24602007 (-)
G14400 NA non-coding upstream 215544 25122090 ~ 25122375 (-)
G14472 NA non-coding upstream 498349 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 610443 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 636500 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 698234 25604780 ~ 25609059 (-)
G14305 NA other downstream 23023 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 338165 24553692 ~ 24566956 (-)
AMCG00016531 NA other downstream 581663 24309256 ~ 24323458 (-)
AMCG00016505 NA other downstream 1019863 23864581 ~ 23885258 (-)
AMCG00016504 NA other downstream 1042382 23841062 ~ 23862739 (-)
AMCG00016562 rnf6 other upstream 101428 25007974 ~ 25015343 (-)
G14392 NA other upstream 174022 25080568 ~ 25083699 (-)
AMCG00016579 NA other upstream 358226 25264772 ~ 25277478 (-)
AMCG00016591 NA other upstream 506770 25413316 ~ 25420371 (-)
G14534 NA other upstream 846449 25752995 ~ 25754472 (-)

Expression


Co-expression Network