G14392


Basic Information

Item Value
gene id G14392
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25080568 ~ 25083699 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17849
CTGCATTTCCGAGTctagagaaacacacacaggcaaccGGACATTTGTGTGAACGTGTTTATTGGGTGTGCGGGACAGTTAGGCCATGAACTCGTAGGGGATGGGCTCCAGCAGCTGGGGCTCGTTGTTCTTGGTGCTGACAAAGTGAGCCTCACGGGGAGCAGCCGCTGGCGTTTAAGCTCCACCCAGGTGCCACTCTCCTTGGCCTCgatcttcttcttctcattctCCTTCACTCGCTGCAGGAAGCTGTCCCTGCTCTTTGAGTGCTTCACGTGCTCAATGCGCACGTTGATTCTCTTGGCCAGGATCTTGCCTTGACCTGCTTGTTGACAATGATGCCCACAGCATGCTGGGTCACATTGTAAATCCTGCCAGTCTTGCCATGGTAGCACTTGTGGGGCATTCCCttctggactgtccctgttccCTGGAAGATAAACTCATCTTACTGGAAGCAAGCATTAGCTTCCCCACATTCAGTGCTTACTCCAAGCTGGGCTTTAAGTCAGCAATTGTGTTTTTCCCACCCCTCTCTTTTCTTCCCTGTATCTCAAATGCAAAAGCTCTCAGAACCGGTGAAATGATTTGCTCATTTTGTCTAAAAGGCAATCGTAGGAGACTATCATCATCGAGCTTCTGTGTGTATCGGATGAGGCACCTGCTCGGTCCGCAAATCACTACGTACCTTGATGTCAACGATATCTCCTTTCTTGTAGATACGCATGTAAGTGGACAGAGGGACGGGACCTGCagcacaaagcaaaaatgattAACCTCAGCCTCGATCAAAGACAGCACCACTTTAAAGACTTACACCGATTAGAAGATGCAGAAAGAGCACTAGGAGGCTCAGCAGGCTATGGAAACAGCGTTCAAGCTGCTCATAGTCAGTTCAGTCTACACATTGGGGTACTCACCATGTTTACGGAAGGGCCTGGCGAACATATACCTCGTCCCCCTCCTCTTGCCTCTGGTGTTCGTCATGTTGGCTGTTTAACTgaaataaggaaacaaaatcacaccTGTTAACACTTAAAAGGAACACCACGGCAATGACACCATGGAGACGGAGAGGAAACGCAGATGTTGACCGATTTAATAAGATCAACTTCTTCGTGGTCGACGTACTGTACACGTCACTGTGGAAGAGCGGAAACCGGCGATTCGGATAACTATTCCAGAACATGAAATTCGGATTCACTGCGCATGACACGGTCCGGGTGGATTCTACTGCACAGGCAGAAAATCAACACATGATAACTAACTACTGAAGACCTTCATTTCTGTCAGGGCGATCCGAGTCATATTACAACCACACCCCAGTTAGAAATTGTATATACCTACACACATCACGGCAATGTACTATTATGACCTAAAAAGTAgtagtttataaataaaacattaatctgCGTCCACCTAAAATCTTACCACTTCCAAACAAGAACATAAATCAGTGATTTCACTACGTGTGCCATTCGCGTTGTGTGTGGCTTAGAGAAGTTTGATAACTAACAGAACTTGGAAGTGAAAAATTACATCCAAACCactaaaaaaaagtgtatttgtaaCTCACTGACAGAGTTACAAAGGGATCTGCAAAGACAAATTAgattaatataatcataaacACTCAGGCCGTTTTCTTCCAAGGCCCACATGGCGAGCCATGCAGACAGGCTGGCGGGGCATCAGTGCTCAATAACAGGCACATTACTAACTTTCGGCCGCGGTTGGAAAGACAGACCAACGCAATGTGTGCTTAAACTGTGCCTGCATTAAATCTAACGAAATCCACTCAATTGTGCAGGTATTAGCGAtgataattttaaacaaatcgGGAGCTCTTCCTACCCCTGCTTCTTCGCAAGATGGCGGGTCCGGCGGAAAGAGAGAGTGCAGGACCCCTCGCTCCGCCTTACACATTGTAATTCAGGTGGTCCTCACTGCCGCCTGACTAGAAAATACACATACTTCTCAATCGCCGTGATTCACTCTCCTGcgctgaataataataataatatctggcTGCGTGTTGATATGCTACATTGCTTGAAAAGCTTTcaaatttatgttttaatttgtattattgaagGACCCACTACAGCTGTCACATGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17849 True 2119 TUCP 0.46 3 25080568 25083699

Neighbor

gene id symbol gene type direction distance location
AMCG00016563 usp12,usp12a,LOC107705210,LOC107591222,LOC107584971 coding downstream 75 25073170 ~ 25080493 (-)
AMCG00016565 NA coding downstream 22998 25056560 ~ 25057570 (-)
AMCG00016564 LOC107584968 coding downstream 79113 24973047 ~ 25001455 (-)
AMCG00016556 NA coding downstream 126935 24930817 ~ 24953633 (-)
AMCG00016555 mtmr6,LOC104951663 coding downstream 186149 24883903 ~ 24894419 (-)
AMCG00016570 NA coding upstream 22633 25106332 ~ 25107565 (-)
AMCG00016569 NA coding upstream 41084 25124783 ~ 25133808 (-)
AMCG00016573 NA coding upstream 131368 25215067 ~ 25218658 (-)
AMCG00016572 NA coding upstream 136605 25220304 ~ 25221568 (-)
AMCG00016574 NA coding upstream 140366 25224065 ~ 25234275 (-)
G14311 NA non-coding downstream 174022 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 300302 24716726 ~ 24780266 (-)
G14222 NA non-coding downstream 396033 24683065 ~ 24684535 (-)
G14218 NA non-coding downstream 462223 24615787 ~ 24618345 (-)
G14214 NA non-coding downstream 474247 24606108 ~ 24606321 (-)
G14400 NA non-coding upstream 38391 25122090 ~ 25122375 (-)
G14472 NA non-coding upstream 321196 25404895 ~ 25405101 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding upstream 433290 25516989 ~ 25520096 (-)
G14496 NA non-coding upstream 459347 25543046 ~ 25545725 (-)
G14507 NA non-coding upstream 521081 25604780 ~ 25609059 (-)
AMCG00016562 rnf6 other downstream 65225 25007974 ~ 25015343 (-)
G14305 NA other downstream 198470 24881148 ~ 24882098 (-)
AMCG00016538 smpx,LOC107721880,LOC107590224,LOC107663668,LOC107705278 other downstream 513612 24553692 ~ 24566956 (-)
AMCG00016531 NA other downstream 757110 24309256 ~ 24323458 (-)
AMCG00016505 NA other downstream 1195310 23864581 ~ 23885258 (-)
AMCG00016579 NA other upstream 181073 25264772 ~ 25277478 (-)
AMCG00016591 NA other upstream 329617 25413316 ~ 25420371 (-)
G14534 NA other upstream 669296 25752995 ~ 25754472 (-)
G14637 NA other upstream 997804 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 1063811 26147510 ~ 26149543 (-)

Expression


Co-expression Network