G14444


Basic Information

Item Value
gene id G14444
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25357887 ~ 25359035 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17913
ctttATTCATGCATGATCAACAGTACGGTACACACTTAACACTATGTAGAAAACACACCACATGAAGTGGAGAGTCCGATGTGTCCAGAAGTGTCACTGTCAGGACAGCAGCGGCAGGGGGGTGACACTGAGGTTAAAAAGCACCACAAacgtgaaataaaaatataaacatatattaccATAATCAGAACTAATGGAGAgcctgacagactgacagagacTGACACTGCAGAAATGCAATTTATTGTTTCTATATTGACAAGCCTAGagtataaaaaatattgaagaaCATGacattatattaactgtattttgcattcttcatttgaaacaatattattcTGTGATCCATTCATGTGAATACAAAGCTGTACATTAAATGACACTTTTTggtcaattaaatattttcagattgtGATGAACAACAATCCAGCCAAGAGAGAACTATATATATTCCACACACCggtgtttaaatgtttgactGTTGCTCCACAGAAATGAATGCAGCTGCAGTCAAAGGTTTACACACCCCGTGTTTTAATCACGACTTTGTATGGAATGGATGGTATGAATACACTTCACTACATATTATATTGCATAATATAAGAAAGCCCTTGATGTCCTACCAAGAATAGCACCAATAATCTATGGCTGATCTGGACCCAGGCAGGGCAGTTTGTTGAAGCAGCCTGCACTGTATTTGACTGGGTGACCTGGCTGCTCTATGCCACCCTGGCTGCGGGGCATCTACCACGATCCTGCTGTCCTGGGGGCTCAGTGCTGGCCTGCCTGGTCGTGAAGGTGCTCCCCTGTGCTGCGCAGCATGTCCATATACACCTTGTTATTCtctctgtgaaaacaaaacaggctgTCTGACACCTCTGATTCTCTGAGCTGTTATCCCGAGGGCTTCAGTTTGAGACCAGCAACACTCACAGCTGCCAGCGTACCTGTTCAACTGAATAGACTCAGGAAGCCTCAGGAAGTATCTGGATATATCCGTTCCTCTGTCCAACATCGTAGGCTGAAATCTCAAAAGCACTTTCATATTCTCTATCcagtttatacaaaaatattgctGTTTTAACTTAAAGCTGAGAGGATTTGGACTTACATGGCAACAGATGGATCAAACATCATGTAACCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17913 True 1149 lncRNA 0.50 1 25357887 25359035

Neighbor

gene id symbol gene type direction distance location
AMCG00016571 pan3 coding upstream 95431 25242014 ~ 25262456 (+)
AMCG00016576 NA coding upstream 157347 25200142 ~ 25200540 (+)
AMCG00016567 gsx1,LOC106603173,LOC106563638,LOC107560336,LOC107719766 coding upstream 174655 25182231 ~ 25183232 (+)
AMCG00016568 NA coding upstream 251717 25103687 ~ 25106170 (+)
AMCG00016560 NA coding upstream 268950 25087611 ~ 25088937 (+)
AMCG00016585 NA coding downstream 48192 25407227 ~ 25408906 (+)
AMCG00016588 rpl19,LOC107084780 coding downstream 156444 25515479 ~ 25520165 (+)
AMCG00016587 NA coding downstream 175014 25534049 ~ 25542045 (+)
AMCG00016586 NA coding downstream 194445 25553480 ~ 25559207 (+)
AMCG00016603 NA coding downstream 520311 25879346 ~ 25887229 (+)
G14383 NA non-coding upstream 87692 25269838 ~ 25270195 (+)
G14363 NA non-coding upstream 213105 25144582 ~ 25144782 (+)
G14354 NA non-coding upstream 235495 25122083 ~ 25122392 (+)
G14177 NA non-coding upstream 938280 24419358 ~ 24419607 (+)
G14127 eif1ax,EIF1AX,eif1axb,LOC105905255,LOC106563585,LOC106590461,LOC108411992 non-coding upstream 982060 24370326 ~ 24375827 (+)
G14445 NA non-coding downstream 1436 25360471 ~ 25360808 (+)
G14448 NA non-coding downstream 4861 25363896 ~ 25366376 (+)
G14455 NA non-coding downstream 63408 25422443 ~ 25423026 (+)
G14502 NA non-coding downstream 245604 25604639 ~ 25611689 (+)
G14510 NA non-coding downstream 313224 25672259 ~ 25678349 (+)
AMCG00016566 NA other upstream 200426 25150348 ~ 25157461 (+)
G14361 NA other upstream 224008 25133198 ~ 25133879 (+)
AMCG00016558 rpl21,LOC107591224 other upstream 272790 25080674 ~ 25085097 (+)
G14326 NA other upstream 347200 25007962 ~ 25010687 (+)
AMCG00016537 NA other upstream 796080 24479706 ~ 24561807 (+)
AMCG00016584 NA other downstream 11261 25370296 ~ 25404840 (+)
AMCG00016598 NA other downstream 366218 25725253 ~ 25758926 (+)
AMCG00016607 NA other downstream 581493 25940528 ~ 25950176 (+)
AMCG00016625 mllt10,LOC106942732 other downstream 926767 26285802 ~ 26302514 (+)
AMCG00016633 NA other downstream 1068304 26427339 ~ 26433656 (+)

Expression


Co-expression Network