G14448


Basic Information

Item Value
gene id G14448
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25363896 ~ 25366376 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17917
TTCCAGGCAACATaccatgtttatttgaaagtatacATAAACACCATGGCAAATTCTGTGGAACAAAGTCATAAAAATAGGCACAGGAACATGAAtatagatttgtgtgtgtgtgtgtgtgtgttggtacAAAACAGTAGGAAAAATAGCTCCGGGAcatgcgggggggggggttctgtcatagaaacaaaaatagcagCATCTTTTACATAACCTAGTGTGACTACAAACACACTGCAATTTAACTactatcaaaaataaaataaaataaaactccatCTGTAAGGCAAAATGGAATAGAAGGttcaaaaaaagcttttctctgcgtctgtgtgtcttttACTTCTCGGACAGTTTTGTTTACTTTGGTGATCCCCTTTTCTTTAATTGCATAAGCGTGGCAATGAACTGCCTTCACAGTGCCCAGAAGAGAAGCCAGGAGAAGGAAGGTCGACTCCAGTCCGCTCAGGCCAGCGTGGTGAGCTTGTCGATGAGGTCGTCGATAGTGTAGACCAGCAGCTTGAGGTCGTCCTTCTCAGACATGCGGTGCGTGCCGTGTTTGCGCAGGACGACGTCCACGTCGGTGCTCAGTACACGTTCGGCCACCTGCATGGAGACGTGCCAGGGGACGTCCTGGTCCTGCATGCCGTGGATGAGCCGCACAGGGCAGGTGACAGGAATGGGGCTCTGCAGCATGCAGTGGTTCTCCGCCTCCTTAATGAACTCCAGGCGCATGTTATAGAAGCCCTCCTCACTGTGCTTGCTCACCAACTTCCACACCCCTTTCTCTTCCGTTTCTTTGCGCACCTATAGGAAGGGATTTAAAAGCAGTGACGAAGTGATCCGTAGCACTGGCGATGCCAATAAGAGCCGCGGTCTTCTCCGGCCGAGCGATCGCGGCAAGGAGCATCAGCCAGCCGCCCATGCTAGAACCCACCAAGATCTGCAGCAAAGACAACACTCAGCTGCACTCACAACCCACCGTACCCACACGGCACCTCCCAGATGCATTCctcacacagcagcagtgggcTGTGGGCCGCAATACAGGACAACTTTCACCTCCAGCACAAATCAGATTAGGACCAACCCTCTATTCCGTCTCTCtgaaatctctctctgtctccagctTCTTGTAGAAGTGTACACACACtaacaattacaaacaaaacccccataagaaaagaaagcaagaaacaaaTACCATTGCAATAGTGTTAATAAAAGCTGGGAAGCCCCGGAGCTCTCTGGAAGCAGCCCTTACCTGTGGTCCTTCTGTGAGCTCGTCCAGCACGGTCAGCACATCCTTCTTCCACGTGCCGAGCGTACACTCTTCCCACACACCTTCCGACGCCCCACATCCCGTGTAATCAAACCTGAGAGAATCCCTTAAATACGAATGACCTAAAGATTTGCAGAAATCTTCCAGCGCCTCTGCCTTCTGCCCGTTCATGTTGGAGGCGAGGCCAGGCAGGAACACCACGCCGGGGCTCTTGCCTTTAATTCTCTGGTAGGCCAGCTTTGGAAGATCTGGGCGATTTAAATACTGCACTGATGACTTCTGTCTTAATCCTGACAAGGAAAAAAAGGTGTAAAATATGAGGTTCTTCGTGAGGTAGCATGGGAGGAAAATGCGCTCTCCTTCACTGCAATACAATCTCACAACTTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17917 True 1671 lncRNA 0.49 3 25363896 25366376

Neighbor

gene id symbol gene type direction distance location
AMCG00016571 pan3 coding upstream 101440 25242014 ~ 25262456 (+)
AMCG00016576 NA coding upstream 163356 25200142 ~ 25200540 (+)
AMCG00016567 gsx1,LOC106603173,LOC106563638,LOC107560336,LOC107719766 coding upstream 180664 25182231 ~ 25183232 (+)
AMCG00016568 NA coding upstream 257726 25103687 ~ 25106170 (+)
AMCG00016560 NA coding upstream 274959 25087611 ~ 25088937 (+)
AMCG00016585 NA coding downstream 40851 25407227 ~ 25408906 (+)
AMCG00016588 rpl19,LOC107084780 coding downstream 149103 25515479 ~ 25520165 (+)
AMCG00016587 NA coding downstream 167673 25534049 ~ 25542045 (+)
AMCG00016586 NA coding downstream 187104 25553480 ~ 25559207 (+)
AMCG00016603 NA coding downstream 512970 25879346 ~ 25887229 (+)
G14445 NA non-coding upstream 3088 25360471 ~ 25360808 (+)
G14444 NA non-coding upstream 4861 25357887 ~ 25359035 (+)
G14383 NA non-coding upstream 93701 25269838 ~ 25270195 (+)
G14363 NA non-coding upstream 219114 25144582 ~ 25144782 (+)
G14354 NA non-coding upstream 241504 25122083 ~ 25122392 (+)
G14455 NA non-coding downstream 56067 25422443 ~ 25423026 (+)
G14502 NA non-coding downstream 238263 25604639 ~ 25611689 (+)
G14510 NA non-coding downstream 305883 25672259 ~ 25678349 (+)
G14556 NA non-coding downstream 567575 25933951 ~ 25935581 (+)
G14623 NA non-coding downstream 799254 26165630 ~ 26165982 (+)
AMCG00016566 NA other upstream 206435 25150348 ~ 25157461 (+)
G14361 NA other upstream 230017 25133198 ~ 25133879 (+)
AMCG00016558 rpl21,LOC107591224 other upstream 278799 25080674 ~ 25085097 (+)
G14326 NA other upstream 353209 25007962 ~ 25010687 (+)
AMCG00016537 NA other upstream 802089 24479706 ~ 24561807 (+)
AMCG00016584 NA other downstream 3920 25370296 ~ 25404840 (+)
AMCG00016598 NA other downstream 358877 25725253 ~ 25758926 (+)
AMCG00016607 NA other downstream 574152 25940528 ~ 25950176 (+)
AMCG00016625 mllt10,LOC106942732 other downstream 919426 26285802 ~ 26302514 (+)
AMCG00016633 NA other downstream 1060963 26427339 ~ 26433656 (+)

Expression


Co-expression Network