G14496


Basic Information

Item Value
gene id G14496
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25543046 ~ 25545725 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU17998
TTAACTTAATAACCACCccacatttattgatttatatatatatattatacagggCAGGGACCCCTATATTTACTTTcataacaaacaaattatacagGTTCTTTATATTcagatacaaaatatacacatagcAGATGCAAATGCTTCAAGTATCAAATGTCTctgtttatataaatgcaatcCAACATACTCAAAGACAATCATAAGGCTTAAGGCATTTCATATAACTAAATATCCTTATAAAACCTCTTGCTAGGCTTAAATTAATTCCTTGTTCAGTGCTTGGAATTACTGCCAACCCAcgtttgtttttgcttatttttaaattgtataaattaagATTTGCTGACTCAAACTGCCATTCAGTTTAAAAATTCCAGGCACCATACAGCGTTTAAACCAGAGTAGCTTGAGATAGTACAGTCTTCAGCTCCGGTGTATTACTCCTTATAGCACCTTATTTAGACACTGTAATGGTCTATAAGGACATATGAAGCAGCTATAGTCACAGAGTTGTAGGAATACCCAGAAATTCAAAGGGTAAAGGTTTTCAGAAGATCGCTGTTGCCATGTAGTCACCATATGGCTTCATAGTCGCTATGACCCTTTGAGACATAACTGGATTTAAAATTACCTTAAAGCATTAACCTTTACTTAGGAAGAGGAAGAACCATAATGCATAAAggtttataatatatttgtaatgtgtatAAGTAGATATTAGGAGTATTCGTTTTTGTTGCTTGTAGTTATGTGTTAAAGTTACGATTTATCTTCTGGTAATCAGTAGTACATTGTATATAAAACCTAATTACTCTCCCAATAAAACTGTTAACGCTGACCAGCTGTTCTCAGATTTGTCTGATCTGTGGCAGGAATAATGAACAGCGGATGATTGTTACCTCTTTGCTGTGCACAATAATTAAAGAACAGTCAGGCTTtacatacatttagttttttacaatCAATGCAGCCAATGTATAATTCTcaattgaaaaatgtgtttatttaagatTAGGGTGAATTTAAAATCATATCCCCTCTCACAGTTTCTGTTAAATTAGtttggttaatttgtttttatatgcacAGGTTTTACTGTATAAAACACCAGTCTCTTAGAATTCAAGTTATTGATTTGAATAAAAACTACCATGCCACTGCTTGGAAATGTGGAATTGCTTTTCTACCTGCTTATAGCGCCCTCCCTGTGATGAGTTGAGATTTTTCAAAGTAAATCAAAAGTGTGAGGTCAGACTTTCTAggaattataaataacaatgtgtttgtgtacaagtttgtaatttgacaTTCACTTGTAGGGCAAAGTTTGGATTTGTTCCTTTCATCCCACTGTAACAAAGTATATAACAAGAAAGACTCAAAGGACATTTTTCCAGACAAACAATGCCAGAGTCAGAGTTGGCTGCAACAAAACACCTAACGTCTGAAGGAGATTGTTTAGATACAGTAATTTCTGCACTTccaaaaatgaaacattcaaatACAGCAAGCCTACATCCTAGTTGCTAAACCAAAGAGGCTGTGCAGATCCATTGCTCCATGCCTCCATGCTACACTGTTCTGATCATGTCATCCTCGGTTCAACCCCACTCCCCCACGCTGCTCCACCATTGAGTATCTGTAACTTGTCAGACAACGTTCCCAGGTGCTATCGGACAGGATTTTCCATTGCAAACAGCTGGCAAAGAGTAACTGCATTCTTGCTGGCTGGCCCCACTTGTTGGCTTCAATCCAGAGCCACAGATTATCATGTATTCCAGTTTGTGTGTAGTCTGCTCCCACAAAAGGCTTGTTTGTCAATCCTGAGATGAAAAAATAGTGTACAAAATCACTGTGTTAAATTTATGGCCTTTATACAGAGCTAAGCAGAGGAAGGCACCTCATGTCACAGAGTCCCTGAGTAGAGCACGGCTCAATGTTTACAATCGCTTCGGTTTTTAAGGCCTACAGTACCATATATTATCATCATATGctcctttttaatttgttgattGGTAGGATTTGAAATGTGGAAGAAAACTATGAGTCACTGCAAAGTAAAGAGAGATTTACGTTTAAAATATCTTCTTGttcaagaaacacacaaaggcacacacacactggatgAAACTTCACATTTTGTATCTCTCCTACCAGTCAAATCTCCtcataagattttttttaatatgctagTGATAATATATTAACTGTCAGGAAAAAAGCCTTTGAAGCTTGTAGAGAAAGAAGAGATTCCAGATTCCAGCTGGTCcccaataataaatacaatttcacacacacacacacacacacacacacacggtatatatctctatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtgtgaaaagggaaaaacatccagtatgcggcagtcctgtgggcgaaaa

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU17998 True 2659 lncRNA 0.35 2 25543046 25545725

Neighbor

gene id symbol gene type direction distance location
AMCG00016594 cacnb1,LOC106600985,LOC103392742 coding downstream 59336 25449909 ~ 25483710 (-)
AMCG00016596 NA coding downstream 93294 25439336 ~ 25449752 (-)
AMCG00016595 LOC106600984,LOC106607252,LOC107754318,LOC105013306,LOC107670909,LOC107745936,LOC107567387 coding downstream 104271 25433834 ~ 25438775 (-)
AMCG00016590 NA coding downstream 119387 25421283 ~ 25423659 (-)
AMCG00016592 abhd10,LOC106590440 coding downstream 175467 25363398 ~ 25367579 (-)
AMCG00016597 NA coding upstream 65838 25611563 ~ 25642333 (-)
AMCG00016600 fbxl20,LOC107727724,LOC107666314,LOC107665129,LOC107549884,LOC107563017 coding upstream 130844 25676569 ~ 25703327 (-)
AMCG00016599 med1 coding upstream 160356 25706081 ~ 25726547 (-)
AMCG00016601 neurod2,LOC102791336,LOC102193051,LOC101464503 coding upstream 279021 25824746 ~ 25825846 (-)
AMCG00016614 NA coding upstream 559191 26104916 ~ 26117450 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding downstream 22950 25516989 ~ 25520096 (-)
G14472 NA non-coding downstream 137945 25404895 ~ 25405101 (-)
G14400 NA non-coding downstream 420671 25122090 ~ 25122375 (-)
G14311 NA non-coding downstream 636500 24905121 ~ 24906546 (-)
G14245 NA non-coding downstream 762780 24716726 ~ 24780266 (-)
G14507 NA non-coding upstream 59055 25604780 ~ 25609059 (-)
G14517 NA non-coding upstream 126579 25672304 ~ 25675200 (-)
G14578 NA non-coding upstream 372305 25918030 ~ 25921548 (-)
G14585 NA non-coding upstream 426061 25971786 ~ 26022263 (-)
G14587 NA non-coding upstream 427809 25973534 ~ 25979563 (-)
AMCG00016591 NA other downstream 122675 25413316 ~ 25420371 (-)
AMCG00016579 NA other downstream 265568 25264772 ~ 25277478 (-)
G14392 NA other downstream 459347 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 527703 25007974 ~ 25015343 (-)
G14305 NA other downstream 660948 24881148 ~ 24882098 (-)
G14534 NA other upstream 207270 25752995 ~ 25754472 (-)
G14637 NA other upstream 535778 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 601785 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 610796 26156521 ~ 26159922 (-)
G14676 NA other upstream 636019 26181744 ~ 26184778 (-)

Expression


Co-expression Network