G14502


Basic Information

Item Value
gene id G14502
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25604639 ~ 25611689 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18004
GCTGTTAATATAATGTGACATTTTAGACAAGATCAGATTTTTCCCCTCTCTCGTTTATTATCCTGCGTGCTCTCTGGTTGCTATGGATGCTCAGGGAGATTGATttagaagaacaagaaaaaaagacgCACAAGAGCTGAAGATGTTACACTCGGCGCTTTATTAAAGTCATGTCCGAGGCTCCTCGGTCTAAACTGTCATGCATAAAGAGAGCGAGGGGGCCAGTGGGAGGATGGTGCAGATTGTGGGATTAGTGCTGGCATTTTCCTTTCTGTCTCACTGGTGGAGATTATATAGCAGCTGCGTCGGAGGCCATCTGATAGCGTCTCCAACCTTGTGCCCTCGGTTCTCTCTCCAACATTTATAAACAGTGACTTTAGTGCAGCTCCAAGCATGTCCAGGAGAGGCACCACCTCTCACAACTGACTTTGTGTCAAACTCAGTTAAATCACTGTCTCATATGTTTTTGGACCAGCAGACCAGCAGTCTAGGGATCTCAAGGGTAGCGATACTCCTAGTTAGGAGTATCACTTTAcactcacaaaataaacaatgctaaTTATGCTCCTAGGCCAAATTATTCTACGTTGATAGATGATTGTGTCTGTATTtgcacacatttgtaaaatatccAGATTGCTGGGAAGGCTGTACAAATGAGCAATGCCTTTGGTGGAATATCTACctgaaaactgcattttaagcTTGTGAAAAATGCAGTAATGTATAAGCCTTTTGCAGCATGTGTTTAAAGCAATTTACTCATCAATATCCTCTGACCCGTCTCCCACCTTTGCCTTGCCCTGCAATATAGAACATTCCATATAGATCCAGACATACAGAGATATATTAgtagtatatacatatacacccACACAGGTCTGGACAAAATTGAGACCACTaacaacattgatttctgaacttggagtggtctcaattttttctagagctgtatatatatatatatgcacatgcacacacatatataattttatttttgtatatatttacatagcAAGATACATTTACAGAACTAGAATCATTAAACTAATTATTGCCATATTGCGCAAAGTATGACAGGGCTCTCAGCCGTgtcacaaagaaagaaaataacccCCTAGTGATCCTTGCAAGGGTTCAGACTAGCTTACTGTACAGCGCTTTTCAACAGCGACACTTCAAAGCGCACAGCCGTTGGTAATGAGAGGAGGAAACGCTGCCGAACAGTGCTTTCTGGCTGCCACAACCCATTCAGTGTGTGGACACTGTGAGATGAGAGGTGTTTGGAAAGTTGCCTCTAGACTGAAATAGGattacatattttggtttggtttactTTTTGTCTAGGAAAGGTGTTGGGATTCCTTCCACagacaatggaaaaaaaacagattaattgttattaatatttcactCCCCTGTTCAACAAGGAACTGTAAAAATGCTTGGCAGTACTACAGCTACCTATTGTAGTGaggtgtgatttatttttggatCAGTTTGCAAATGAAAGCGAGAAAGCAATTAACAGAAGACAATATGACGTAAATATGGGACTACACAATATATAatgacatgattaaaaaaagaggTCAACTCATATATGACTCATACATGATCTATTTTATTGACCCTCGTGCATTATCACTAAAATGTCAGTTTGGAATAGTCTTAATGCATGTTGTTTCAGTGTAGAGGCAACTAGGGGATGATTCGTTAGTATTGGCTCCATTTTGCAGCACTATCGTCAAGCAGCATCCAGAGACCCTTCATTGTCTTCCATTACATTTAGTGCATCTTCTTGTGACTTCACCATTACAGCCCCAGCATGGCCTGGGGCATGTTTTTCCAGTTGGTAAAAGATTTATTAATGAGTAAGGATGGTGTGTATGTTTGTTAGAGTTACTGTACCTTAACATACCTACAGATTATCTATTCTCATAAATGGCTGCAAAAAGTCCcattaaaaaactatttgaaaaactgcaaaatgtaataaatcaaattagaaCCAGTCTTACTCATGAGTAGATGTATTACCAACCAAAATGTTCTATTAtactaatttagtttaatttatactaatagagggggtgggggttgtatGAAATCACCAAATATTTGGATGCTGCTCAGAGGAGTTCTTTATACAGATGGTCTGCATACTGCAAACAGGGACTTCTCTGTAgatacaacaaacacaacagcaaccTTGTTGTTTCCATTTGCTACAGTGCTGAAAAGGGTCTGTATTTAGTCCTGTGCTTTTTCTGTCAGTGTTGGAGTGATGTCCAGAGCTTTTCAATGGTAGGCTCCTTTGGGGGGTGTCTCTGGATCAGTACATTAGGAAAGGGTCCAACAAAGGCTGTCAGAGAATGAATAGTGTGATGGACCTTGTAGGTATACATTCTTCTTTTCAAGCCGGTTTACTGTGGGTGGCTGCTTAGCAGAGCTATAATTGTTATATAACATCTGGTAGATCTTgatccccttttttttttctcccattttcTCCAAGACACAGTTGCTATTTCTGTCAACGGCTTTCACAGGATTCTGTCTCCTGACCTTTCTCGTAAACATTCAGTTGCGCAGAAGAAAATATCCCTGTAGACAGAGACACTGGCAGAATGCAAAGAGAAGGAGCTGGGAATTGCTTGAGAGAAGGAGCTTTTCTTagacaatggaaaaaaaaaatgtttaacaatGTAGGGACCTATACACGTGACATTCAGTTCAGTGGCAAGCTCCCTTTCCATTTCCATCACACACAATATACGCCAAGTATTGACAACAGTACAAGAAGACAGCTATAACACCACACTTCGATCAGTGCCCGTCCCGGGGGGGAATGGCTCAAAGACATATCAGTCATTTCCAAACTCTTCCATCACATATTCTCAGAGGGCAGCATCAAAGAGCCCGAACAGTGAGAGcaaattttaataacattaaatctGCTTTGCTTTTCCCACCCCAGCCGATTTAATAGGCTTAGAAAAATGCTCCAAAAAATTGTGATTAAACACTTGTTCCATAACCTCATTTAAGGTCATTAATATACTGCAACTCTACTTTGAGCAGGCTGTGTCTGCTCACAAACATTTGAGAAAAAATCAAGTCTTTTCAAGTGcatcatttgtattatattaccATTCCCACACAATACACAGTTATACAGTACTTATGAAACACAAAGCTATAGGTTTTTAAAATTACTCTTCATTTGAATGTGCTACAGCAGTTGCTGGTATTTTTAAACAGCAAATATTTGGATATGTGTGTTAGACAAATACATGTAACGACAATGCAAAGATTAATATTGCCAGTTGCATTCAGCACACTgtgcaaaggaaaataattgacATGCATGTCTCTAAATACACaagtctgtttcctgttttctgtggcTTGTTCCCTACTGGAATTGAATGCCGCAATTAATAAAGTGCAAGTGCAGCTATAAATAACAGGTGAGCTACTGGAGTCTAAATTAAGGCTGTGTAAATCCCAGTGCAGCACAGGTCTGGAGAGAAGCCAAACAGGGCAGGGAGAGGAACGCCGATTATCACAGACACCTCACTCTCAGACATAGATGCACACcttacactctcacacactcacaagcCTGACTAGAAACACTGTAGTGCTTTTCAGAAGCATCAGTTTTACCAATTTTGTGTTCCTCACAAAATCCACTACCTGTAAGTCAAAAGTCAGATGAGATTGTTGGATCTGTTGAGAGAGATGGTCTGATCAGCCACCTTGTTTTGCAATCTTCCTTATGCTCTTAAACATGACTGAACCTATAAACACATCAGCtgtactttcttttttatatttattcataaattaatacatatatatttggacTATTAGGGTACTTACTGCagcattttctacacattttctttttttacatatagTACTTTTTCTCCCACTCGGACTTCACCTTATATTCCACATATATCTTTATAAAGACAAACTGTTATACAATTgtagtcaaaagtattcaaaGCCTTTAATTGAAACAAGGCAATTTAGTGATTCactaatttaattatacaaatcaaGGTGATTAAACTACACTAATGTTACGTGTAGTTAAGACAGGGGTTGTGCAAACTGATCTCCAAGTCTCTTGTCCACCTCCTGTGCCAACAAGATGAATCCAGGTTGAATCAGTGTCCAGTACCCTCTGAAATGTTATAATTGATCTATTCAAATTATGTCATTAACAATTATTCAGAAAACTAAACATCACTGAATAACACTGTTTCAAATGCAggttgtgaatactttccgCTGATCTCACAGAAGCACACGTGCACACAACCCTTATGCTAAATATACAATCACAAAGACCCACAGCTCAAAATCCACCCCTGCACTCAGCCCTCATATAGCAAGTGTGAGTGTATAGATGCCACCAATCCCCTTCCCtgtcctcccctcccccactcccTGGCCCAACTCCTCCTGCAAATCACTCCCTCTGCACCGCACTGGGAGGCACGCTGAGCACCAGACAGTCAGGAAGAGCACATTCAAGCCCTTCACACGGATGCtttgacagatttttttcttcctttcaaaaGACAATAATCTCTTCAAGGAGCTGCTGCTCCTCTTTGTGAAGCTGTCGCGCAGTTTATTTATAACTCCCTTCCTCTCTGCTGGCTTGATGAAACAGGCTGGGTCTGCTGGTGCGAGGCAATAATCCAGGCATGGATGACGACTCTCCCCACAGAGCGGCACTCAGTAACAGCCCTCTGACTCCACCTCTCTCAACTGGGACTGATCCCATCTCTCTTTCCAGGGGCCCGTACACCGGTTATTCACAAATGAGGACCTTTTTCTTAAAACTGTACATCATCCTATCAAGCGGGAACTACAGACCCCTGGAGATTAcataattgaaaacaatatgcTCAAATTAGGAACCATACTTAATAATGAGCCCATTGATTGCCAAGTTGTGTGAATCAAACATgcacatgaattaataaatgttcAGAATGTGATTGCGCATGCTtttatcttatatatatattttcaactacGTTATCTCTGGGGCTCCATAGGAAACACAAATTACTCTTTATACAAACACCCTCTTCCACACATTGGGCTTTAATGGACAGCTCTGCTGCAGTGAACTAAAGCCTGCCTTGTGAAAACCCTGGCCCCCAAAGATGCTCAGCACTAGCACTGCCAGACCCAGGGCAGGGCAGCCATGGTTAATGCTACAATCAGGTGGGATGTAAAACAATCCCAGAACAATGGATAACGCAATGTGCTCTCTTTCAAAGACACACTAAGCAAACACAGTAGCTCCTGTAGCTATATGTTCACCAGGCATATTGATACTAAAAGCTACTGTAAACTGGATGCAAAGAATAGGACAGAAAAGcatgcatattaaaaacacaagacacacacgatatactgtatatatccaTATTTGCCTgaaatatacttaaatatattgtgaaatatatattctatttccaaagatatatatgtttaaatagtgatatgtttaataaaattcattttctgtgtggCTCTGATGTACAAATGCATAGTGGAACCACTATGTGGAATATTCTTCAAATCTCTGTAATGTGTCCTATATGGAATATTGCTTAATTGCCACCAGCAGTGCTGACTGATTGAAAATGAATTCACAAATAGGCCATTAGGGTTGTTACAAAGTGTCCCAAGCCTTAGTTCCCAGAATACACACAAAGCCCAGCCACAACATGGAAAATAACAAGTGCTGTCTgtaaaaaacattgttagtgTCAAAGAAATGAGCTCATTTCCATTGCTGGATACTGTCCTGAAAACAGCTCCATTTCATTCAAACTCAAGGGACAAAAGCCCCAGGAAAATGGGATAATACACACTATATCTCTATGCAGCTTTTCACTGCCCTGGTCAGTACTAGTCTAAACACTGTGTTCTAGCTCTACTAGGAGAGATCGTAGACTGTTCAAGGAAGTGGAGTTGTGCATTCCTACTGTACAATACCaccctaataaataaatttgagACAGGACAGTACATTCCCAGTCCCACAGCTCTACCCTCTCCCCCCCACAACCCCTTCCAGCAAAGACTTTGCTGGAACAATGCAAGGAAACACATGCCAAACAATCTAGAGTACATAGCAACCTTAGAAGTGCTGTTAGAAAGCTACAAGTAAAACTACACAGACTCTGTGCGAGTCGGTTAAGGAGCAAACTCCTATCCTCTCTGTCATGCAGCGCACCTTCACCATTATCAGAATCTCCGAAGCTAGTGGTGACCTTTCCCACCGTCCCACCTCATCTTCCCTCTCTCCTGGCTGAGCCTGGCAAACTGGGAGAGGGACCTACAGTCTTAATACAGACAATGAAAGCAGCAGCTTCAGTAGAAACCTGTTTTGGATTCCCAAATTGTGCCTGAGGTCAAACTGGGTGAGTGGATACCTCCCAGGTTCGCTGCTGTACTAATTACAGTAACTCTAAGTCTctatagtagtaataataatgaaaaaaataacactaattATATCTGTAACACTTAGACctgtaattacacagtaatCACTTAAGGAGTGCCCATAGGTCCAGCCATGCAGTTTGGTGATTTGGGGGTGAACCAGTCTTCAGTGCAGGGTGTGCTGTTGGGGGGGGAATATTTGGGGTTCAGGACGAAGGCAGCGTCGGCCCGCAAACCCTCAGAACTCCAGGTTTTGCGGTGCGTGGGCCCCTGCTGTATCGCCAAGCTGCCCCCTGaccttctccccctcccctcccgcTCGATCCGAGGGTGCAATGAGGTGCAGGTTTCAGGGGTGTCCCAGGCTCAGCCACGCGCTGGGGGGCggtgtgtgtgcttttgttttttgtcggGGTGCAGGCAGCAGGAATAGGCTCAGATCTCCTCCAGCAGGTCGCAAGGGACTAGGCCACGCTTCTTCCCGCTGGTCAGCCTCAGAAAGCCGTTCACCTCCTCATTCTTCCCCACGCAGATCTGAGAGCAAGACAAGCAGGTGTGTGAG

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU18004 True 7051 lncRNA 0.45 1 25604639 25611689

Neighbor

gene id symbol gene type direction distance location
AMCG00016586 NA coding upstream 45432 25553480 ~ 25559207 (+)
AMCG00016587 NA coding upstream 62594 25534049 ~ 25542045 (+)
AMCG00016588 rpl19,LOC107084780 coding upstream 84474 25515479 ~ 25520165 (+)
AMCG00016585 NA coding upstream 195733 25407227 ~ 25408906 (+)
AMCG00016571 pan3 coding upstream 342183 25242014 ~ 25262456 (+)
AMCG00016603 NA coding downstream 267657 25879346 ~ 25887229 (+)
AMCG00016606 NA coding downstream 294435 25906124 ~ 25918145 (+)
AMCG00016604 NA coding downstream 317888 25929577 ~ 25933057 (+)
AMCG00016605 NA coding downstream 344442 25956131 ~ 25958833 (+)
AMCG00016602 pgap3,LOC107694083,LOC103358570 coding downstream 349857 25961546 ~ 25973771 (+)
G14455 NA non-coding upstream 181613 25422443 ~ 25423026 (+)
G14448 NA non-coding upstream 238263 25363896 ~ 25366376 (+)
G14445 NA non-coding upstream 243831 25360471 ~ 25360808 (+)
G14444 NA non-coding upstream 245604 25357887 ~ 25359035 (+)
G14383 NA non-coding upstream 334444 25269838 ~ 25270195 (+)
G14510 NA non-coding downstream 60570 25672259 ~ 25678349 (+)
G14556 NA non-coding downstream 322262 25933951 ~ 25935581 (+)
G14623 NA non-coding downstream 553941 26165630 ~ 26165982 (+)
G14695 NA non-coding downstream 601605 26213294 ~ 26215317 (+)
G14703 NA non-coding downstream 622637 26234326 ~ 26304342 (+)
AMCG00016584 NA other upstream 199799 25370296 ~ 25404840 (+)
AMCG00016566 NA other upstream 447178 25150348 ~ 25157461 (+)
G14361 NA other upstream 470760 25133198 ~ 25133879 (+)
AMCG00016558 rpl21,LOC107591224 other upstream 519542 25080674 ~ 25085097 (+)
G14326 NA other upstream 593952 25007962 ~ 25010687 (+)
AMCG00016598 NA other downstream 113564 25725253 ~ 25758926 (+)
AMCG00016607 NA other downstream 328839 25940528 ~ 25950176 (+)
AMCG00016625 mllt10,LOC106942732 other downstream 674113 26285802 ~ 26302514 (+)
AMCG00016633 NA other downstream 815650 26427339 ~ 26433656 (+)
AMCG00016640 NA other downstream 878249 26489938 ~ 26499242 (+)

Expression


Co-expression Network