G14585


Basic Information

Item Value
gene id G14585
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 25971786 ~ 26022263 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18115
TCGATCAAACGGTGGTGTTTTATTAACCCATTGccagacagacacagtcagCACAAACAGAAATCTGCaatcactgaaaaatatatgtacacacacacacacacatttatttatatatattaataaacacatatatatgtgcaaatatatatgtatataaaacatttttattaaaaaaattacaaaagtaaaacaataagaTTCCCATAATTAATAACCATACAACAGTGTACAATAAGTATATTATTAGTGCTTTAGAATTGAAATTTCAAGAATAGTAGTACCAAAACAAATTTAATgtacaaatatcaaatatacaAGTCTATGTTATTTCTCCCACTCTTCGTTCCATCCCTTGTTACCTCCCTCCAGATCTCCATGTTTTCAGAGGTTAAAGCAAGTGTAAAACAAGTAGTGCATGACTAGGTTTCTCTGTGGAGTTTACAAATGGCCAGTACAGGCTTGTATTCAATATCAAAATTCTCCATGGGTCCTGCCACATAAAACAAGTACCGCAGAATTTAGGAGGGTTTTCTACTTTTTCCCCATTACAATTGGCTAAGAACTTATTGTACCTGTATCATATATGACTGTCTTTTCTTGTACCATTCCACATCACATCGGACATGCACTTCAGTGTAGACGTAGACACCAGAGGCTCCAGTAATAATTTAAAGAGATGGATTTGGATGTTTCAAAGCTGACAATAATGTGTAGTAATAAGCAAGTCCAAATTTGAGCAAATTGAGTAATTTATGTAGTTTTGAtgataatgtatattataaaataattccaAATCACTTGTTTGTGGAAATTAGATCGTTCAGCAAAATAAACTAATCTTCACCAACCTTATATAAATAAGGCCTGGGTCTAAAAATTCTTACTTGAAACACTAtgatttaaattgatataattTCTTTAACtttgcttaaataaatataagcatatatatatatataactattattattgacaaatttgacaaaataaaccTAATAAATTGTTGCATCTCTGGCTCTAGTAGAAGTCACAAGGTGACTTCCTATGATGattctgatattttattaagtattattaAGTTTCAATAGCATCCAAAACAACAGATGCATCTGCCCTGCAATAGCAAATTTAGGAAAATTATGGACTCAACTTTGATTATTTGGGGATCTTACTAAGTAAGCAACATGATAAACAACCCTTTAAGTAATGGGACAGAAAACCATGTAAATCATTAAGCAAAGAGCACTTGACAAGTGCATACTGTTGCCTTGTGAATCCCAGTGAGGGGATGCAGTTCACACACAGGAACCTGCACCCCAGCAGATACACTTTCACAGATCAGTTACTACATTGTTCTGaaagatacattaaaacaaataatgactTACAGTAAATTGTGCTACAGGTCAATAATAAAGGAAGGAATCTGACTACTTTAAAACTTTACAGAGTAATTTTAGTGTTAACACACTTCTCCAAGCTTGTAAAATACAGATGCTGGTGAACCAATATTTACAAGAAATACAATGTGTAACCCTGCACAACTCTCAGGACATGACAAGGGGAGTCTGTAAATATCAAAACATATAAACAGACAACAGGTACAGTGTCAGAGAAAGCAGACAGGACCATGCAACATCCCCTACCTCCCTTCACCCCCACAATGTTTCTGCTCCACTTCTTCTTTGGTAGGATGAACTACAATATCACATTACCACACCAATAAACTGAACATAAATTCTATGGCTGAAGTCCCTAATCCCACAATCTGTCAATGAAGACTGTATTCACTTTAAGAAAGCTTATGTCAAACACTTTACACCATTAAATATGTAgaatgtttttcacaaatttagAGTCTAGTTACTTTCCCCTTCATTTTATACCTGACTTGATCTCCCTAGATCACTTCACCAGTTAATTCAAGTTAATGAGGGCTTTGGTCACTTTGGTCAGTTTCTTTTAATATtctgtaatgaaaacaaaggatTGATTGATCCTCAGAGACTACAGGAATAAGATGCTGTACCCAGCGATCCAtacgtttgttttgttcaaatgtaCGATGTGAGAAATGGCTGGTTATTTTACCATGCATATTGACCAGCATCAACTTGTTATCGGTATTAGAAACTGATCCGAATTTCATACTGAATTTGTCATGCCCCAAGCTTTTCAGTGACACCAAGTGGGAatgcagtaataaaatacagatctattgttctttttttagaaAAAGAAGCACATTTAGATCAAGAATCATACACTGAGGTGCTTTCTCTGGATATCAGCACAGGCTGATACACAACAGCAACATGGcatcaacacacagcacactacCATACAGGGTCATCTAAGAGGGGGGAAAAGGCAGGAGAGGGATTGCCAGTGAGGATTTATGGAATTTACTAAGGGCAACCATAGCATCTGATGACTAATAACCTACATTATCATTTGGGATTAAAATTTTTGGCTGTTTGTTAATGCCCGCCAAAATTAAGTTTGGACTGTGGACTAAGTTACTCAACTCTTGCTGCAGAACATTTTACCACACCATACTTATAAAGCATGCCCTTTCCTTGCAAATCCCACCACCACTGTTTTAGAAAGGGGAATAACAGTCTGCCAATATTTCACCATGATATTTTCTTGTTAGAAAGAAAGCAGATGTGCatctgtgtcagtgttttatGAATGTTATCCAATGATAATGACCTGTGTAGAATCAACCCAACGACGTTATTGGTTCAGCTCAGACAGGATTGAGGTTCAGTAGTCTGGATCTTTTGATTCTCTGAGCTCACAGTAAAACCTGAAACAAAGCAGATATTTCCTGCTTGCTTGATAGTCCAGTCTTCCCAGTCCACAATGGAGGCCTTCCGTGGATCAGACTATACTGCATTTGGCCTCTCACAGTTTGAGTCTTCGTACCATAGCCGAGGTGACACTCTGGATGGGCACAGCTCTTATGCTGGATTGAAGCTGGAGTCTCTTGGCTCCCCCCAATACCCAAAGAGCAATGCCATTGTGCTCGACAGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18115 True 3044 lncRNA 0.46 2 25971786 26022263

Neighbor

gene id symbol gene type direction distance location
AMCG00016601 neurod2,LOC102791336,LOC102193051,LOC101464503 coding downstream 145940 25824746 ~ 25825846 (-)
AMCG00016599 med1 coding downstream 245239 25706081 ~ 25726547 (-)
AMCG00016600 fbxl20,LOC107727724,LOC107666314,LOC107665129,LOC107549884,LOC107563017 coding downstream 268459 25676569 ~ 25703327 (-)
AMCG00016597 NA coding downstream 329453 25611563 ~ 25642333 (-)
AMCG00016594 cacnb1,LOC106600985,LOC103392742 coding downstream 488076 25449909 ~ 25483710 (-)
AMCG00016614 NA coding upstream 82653 26104916 ~ 26117450 (-)
AMCG00016615 NA coding upstream 129348 26151611 ~ 26155450 (-)
AMCG00016624 LOC107733370 coding upstream 190123 26212386 ~ 26215060 (-)
AMCG00016629 LOC108438403 coding upstream 282652 26304915 ~ 26309363 (-)
AMCG00016628 NA coding upstream 317230 26339493 ~ 26343614 (-)
G14578 NA non-coding downstream 50238 25918030 ~ 25921548 (-)
G14517 NA non-coding downstream 296586 25672304 ~ 25675200 (-)
G14507 NA non-coding downstream 362727 25604780 ~ 25609059 (-)
G14496 NA non-coding downstream 426061 25543046 ~ 25545725 (-)
G14487 rpl19,LOC101068736,LOC103368168 non-coding downstream 451690 25516989 ~ 25520096 (-)
G14650 NA non-coding upstream 75465 26097728 ~ 26098972 (-)
G14723 NA non-coding upstream 252914 26275177 ~ 26303459 (-)
G14765 NA non-coding upstream 372669 26394932 ~ 26395425 (-)
G14775 NA non-coding upstream 402769 26425032 ~ 26425250 (-)
G14818 NA non-coding upstream 408192 26430455 ~ 26468099 (-)
G14534 NA other downstream 217314 25752995 ~ 25754472 (-)
AMCG00016591 NA other downstream 551415 25413316 ~ 25420371 (-)
AMCG00016579 NA other downstream 694308 25264772 ~ 25277478 (-)
G14392 NA other downstream 888087 25080568 ~ 25083699 (-)
AMCG00016562 rnf6 other downstream 956443 25007974 ~ 25015343 (-)
G14637 NA other upstream 59240 26081503 ~ 26083167 (-)
AMCG00016617 NA other upstream 125247 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 134258 26156521 ~ 26159922 (-)
G14676 NA other upstream 159481 26181744 ~ 26184778 (-)
AMCG00016623 NA other upstream 216819 26239082 ~ 26241390 (-)

Expression


Co-expression Network