G14650


Basic Information

Item Value
gene id G14650
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26097728 ~ 26098972 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18197
TGGAAGGCTGTAAGGCACAAGTGATCCTGCCCCAACGCTCAGGAGCTCCTCCAGTAAGAGCAGCCAGTGCAGACAAATAAAGCAGACACAAGGCAGTCAGTATCTCAGTGTACTTTATTCTCCTGTTCTCTAAAGCTGAAAGCACACACAGGACAGAAACAAGTAGCACTGAGGAATGGTCAGAATCCCCCATTTGCAGaacagcatttttctttttcccccaataagtacaaaataaccacaaaaggcaataatagcaataaaaaaaaaaaaaaaaaaaagagcaaaatcAGATTCAGGGAGCTGGAAAACAAGCCCGCCTGTGCCAGAGCCACCAGTGCTTCCCTCTCAGCAGCAGTGGTTGAAACCCCCCCATCACACCGGACTGACAGTCCAGCTCTGTGCTGACAGTGGGCGGGCAGGAGGAGCGGAGGGCAATGAGGTGCCTGCTCTAGACTGGTAAGTGGTCAGCAACGCCCTCTGGGACATGCTGCCTGTCCTCATGAGAAGCACCTGATCACAGTAACAGGAGACTAAACTGGGACTTGTGCCCTTCAGATCTTAAAACAGACCCTTTTGCCTTGCCACCTGCCCCTACGATGTTTCTGTATTCAGTTTGCTGCATCTGATATGTAAAAACCAGATCAAAAcatcatgagaaaaaaaaaaaagctattgcACAATAAAAGGGAATATGAAGGTTTAGAAGGATCTTAAGAGCAATGCATGGCAGTCCAGGCATGGGGAAATATATATGGATCAATATTGTGATCTGCCATGACTTTAGACCAGCAAAGCTTTAATGGGGTTTATTAAAACCCAGTTAAAATTCCTGCCACTGGCTACACTGCAGAGATGCCTAGAATGAAAGCCACACTAACAGCCATTTCAGCCCAGACATCACTTTTGCATAAATGTGGTTATGGTGAGTATGTTAACATAGCAATCACCAACCTATAGATAAAAACTCAAATACAGGAACACAAGGGAAAAGTGTCAGTGTCTGACAGATCGGTAATGCTGTGCCGTAAGAcatctttgtatttttgtgcattATAAATCACGCATTTAACACACAAAAAGTATTACACAATGTATTGCTGAATGGTATCCAGTCTAATTAGGATAACAATAATAAGTTCCTGTGGAGTAGAATACCGAGTTACCAGTCTGATCAGgccacacacacccccccccagACTCCAAAACCCCTCTCCTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18197 True 1222 lncRNA 0.44 2 26097728 26098972

Neighbor

gene id symbol gene type direction distance location
AMCG00016601 neurod2,LOC102791336,LOC102193051,LOC101464503 coding downstream 271882 25824746 ~ 25825846 (-)
AMCG00016599 med1 coding downstream 371181 25706081 ~ 25726547 (-)
AMCG00016600 fbxl20,LOC107727724,LOC107666314,LOC107665129,LOC107549884,LOC107563017 coding downstream 394401 25676569 ~ 25703327 (-)
AMCG00016597 NA coding downstream 455395 25611563 ~ 25642333 (-)
AMCG00016594 cacnb1,LOC106600985,LOC103392742 coding downstream 614018 25449909 ~ 25483710 (-)
AMCG00016614 NA coding upstream 5944 26104916 ~ 26117450 (-)
AMCG00016615 NA coding upstream 52639 26151611 ~ 26155450 (-)
AMCG00016624 LOC107733370 coding upstream 113414 26212386 ~ 26215060 (-)
AMCG00016629 LOC108438403 coding upstream 205943 26304915 ~ 26309363 (-)
AMCG00016628 NA coding upstream 240521 26339493 ~ 26343614 (-)
G14585 NA non-coding downstream 75465 25971786 ~ 26022263 (-)
G14587 NA non-coding downstream 118165 25973534 ~ 25979563 (-)
G14578 NA non-coding downstream 176180 25918030 ~ 25921548 (-)
G14517 NA non-coding downstream 422528 25672304 ~ 25675200 (-)
G14507 NA non-coding downstream 488669 25604780 ~ 25609059 (-)
G14723 NA non-coding upstream 176205 26275177 ~ 26303459 (-)
G14765 NA non-coding upstream 295960 26394932 ~ 26395425 (-)
G14775 NA non-coding upstream 326060 26425032 ~ 26425250 (-)
G14818 NA non-coding upstream 331483 26430455 ~ 26468099 (-)
G14832 NA non-coding upstream 423832 26522804 ~ 26523047 (-)
G14637 NA other downstream 14561 26081503 ~ 26083167 (-)
G14534 NA other downstream 343256 25752995 ~ 25754472 (-)
AMCG00016591 NA other downstream 677357 25413316 ~ 25420371 (-)
AMCG00016579 NA other downstream 820250 25264772 ~ 25277478 (-)
G14392 NA other downstream 1014029 25080568 ~ 25083699 (-)
AMCG00016617 NA other upstream 48538 26147510 ~ 26149543 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other upstream 57549 26156521 ~ 26159922 (-)
G14676 NA other upstream 82772 26181744 ~ 26184778 (-)
AMCG00016623 NA other upstream 140110 26239082 ~ 26241390 (-)
G14816 LOC108438405,LOC108438407,LOC107666325,LOC107563033,LOC107666324,LOC107753907 other upstream 328367 26427339 ~ 26520397 (-)

Expression


Co-expression Network