G14676


Basic Information

Item Value
gene id G14676
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 26181744 ~ 26184778 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18225
GACATTTTGGCCAGAACCAGTTTTATTGGGTTTGTACAAACagggcagggtgggggggtcaggCAATGCTGCCCGCATTGGAGGCAATCCTGGGCCAGAGGTCCGCACACTCCTTAGCCACAGGACCCGTGATGGCcgagcctTCATCTCCCCTTTGTTGTTGACTATAACCCCTGCGTTGTCTTCGAAGTACAGGAACACCCCGTCTTTCCTCCGGTAGGATTTCCGCTGCCGTATCACTACCGCAGGATGCCTTTTTCCGGAGTTCTGGCTTGCCTTTCTTCACAGTGGCCATCACCATGTCCCCCACACCTGCCGCCGGCAGCCTGTTCAGACGGCCCTTGATGCCCTTCACGGAGATGATGTACAGGTTCTTTGcacctgagagggagagagaggccgTCAGGGACAGAGTGAAGACTGATCCCCGCAGGCAGTCTGACCCAGGCCTGCAACAGGATTTACACAACTAAGTCATTTCATTCACGCGTTTCAATGTAAGCAACAGCTACAATATTGgtcttttccttttattataaCCTGGGAGAATTGCATGTGAATCTTAAAGGATACACAGACAAAACTGgatcttaaaacaaaatcccaaagGTCCTGGGGTAGAGCATTGTTAAAGCTCCGGGGCATGCAGACGGAACAAGCCCCGGCCTGCACCTCCGCCAGCGACCCACTGAGGTCAGCACTACACACAGGGGCAGCGCAGGGCGGCAGTGTCGCACCGCGGATTGAGAATGTACAGCACATGTTGCCGCCTCCTCACCCAACAGCGATGCGCTTCATGTGCCCTTCCACGACAACTCACCGAGCCACTGATCACAGGCGAAGCAAGTGCTTTTTAGAAGGGGGAGATCACAACAAGGGGACCAGACTGCCACTACACTGCAGCTGCATTATTTTCAGATGGCAGGAGATTATAGGAGCACTTGGTGGCTCCAAGAGAGTCCTGAAAGGTCTCGCGTGACTACAAGTGTGACACCAAGACCCCTCTCTGATACAATATCAGcccggggaggggggggttgcTCACCTGTGTTGTCAGCGCAGTTGATCACAGCCCCCACTGGGAGACCCAGTGAGATGCGAAACTTCGCACCGGACGAACCACCACGTCCTGTagagaaaagggagagagatatTATTGCCAGTTCTGAGCCCAGATACCAGCTTGATTCCCACACCATGCGGTCCAGCCCGGCCCAAACAGTCACTCCACCCGGCCTACGATCCCAATATCCCATACACTCTGCTTAAGGAGAACTTCTTGACTGGAAGTTTCAGCAGCCTGCCCAAAAAGAGTATTGTGGCTGATTAGTCCTGCTCACTACCATTATTTCGTAGTAGAGGACTTACATTTGTTACCATTACCCATTAATACAGCAGAGTTAactggagtaatctaggtagtgccttgctcaagggttcAACAGCAGGTCGCCCAcatgggattgaacccacgaccctccacTCAGCAGTCCTAaccacactccacactgctgcctgtacataaatatctgaaatacataaataaacagcactCGTCTCAGCACTGTACTGGTAAAGTGCACACGCACATGCGCAATACAGGACAGCAGGGGTCATGTACAAAAACGCGTCAAGTCCTTACCTCTAAaatgcaccccccaccccgatGCACCGCAGAGCTGCTAATCGGTCCGCCCGGACCCTGAAGCAACGACACTAAACACACACTTCACTACATATCCAAACTGCACTAATTACAACAGTGTAAACAGACAGCGCCACGTTTTAACAGTGTACAATACCACTATCAAATGCTTAAACCTAAACTAGACAATCGAGGCCGGATGCAAAATGTACGGCACTAACCAAACAAGATGAAATAAACTAAGCATCCCTCGTGTTGCAGAGGCCGGAGATGTCGCGTCTATTCCCAGCTTCAGGACTCCCACTCGCAGCCCTACCTCCCGGAGACAGTACGAGCGACTACCGCCTGTCCACTCAGCACAGTAAAGACACCACAGCCGGGCCCCTGTTTTTATATGCATCGGTGGCTACTACCATTTTAACAAGCCCTCCAGCTTAGGCCACAACACCCGAGACATTCTGATATGCATTCAACATGGCGGCCCACAGACGGGACCGCTGTGCTAAAACATCATAAATCTTCGTCTGTTAGTTTTACAAATGAAATACGCAGCACCTGTGAGCGGACAGacattgttttgattaaacTCAGTGTCTGCGAGCCCCCACTGGTCCCGAGATTCGAGGATGCCGGGGGATTGTTTTCTCTCGGTGCGGACATCGCTTACCTCTCTTAGACATGTCGGTTCACG
>TU18226
GACATTTTGGCCAGAACCAGTTTTATTGGGTTTGTACAAACagggcagggtgggggggtcaggCAATGCTGCCCGCATTGGAGGCAATCCTGGGCCAGAGGTCCGCACACTCCTTAGCCACAGGACCCGTGATGGCcgagcctgagagagagagggggagagagttcATTATGTGGAACACAAAGGTCTGCTGCAGCTTCAGGCACACGTCAACGATCCTGAGAAACATGTATAAACTAATATACGCCTGTCTGAACCGTGCCCTACAATGTACAGTTATCACTGCGGCGCTCCCTGCATTTGCATGAGTTACTGTAACCGTGTAAAAACTTGCACCCATACACCAGCACTCATGTGGCGTTGTGTATAATGCACCACATACGGACTAAACAGCATTCAGATTCTGGTAAACCCAAtagttatatatacaaaaataaaactaatttgatCTGATGCCTTTCAGGACATGATTCTAACAGCCACAATCACATTCTCTTTGGGGGGGTTAAATCAAGTACAATCACACGACTGCAGCTCCAGCAGACCGCAGGCCAGCACTACACACAGGGGCAGCGCAGGGCGGCAGTGTCGCACCGCGGATTGAGAATGTACAGCACATGTTGCCGCCTCCTCACCCAACAGCGATGCGCTTCATGTGCCCTTCCACGACAACTCACCGAGCCACTGATCACAGGCGAAGCAAGTGCTTTTTAGaagggggggggcgggggtgtaCATGATTGCAGTTCAGACTCACCTTTCATCTCCCCTTTGTTGTTGACTATAACCCCTGCGTTGTCTTCGAAGTACAGGAACACCCCGTCTTTCCTCCGGTAGGATTTCCGCTGCCGTATCACTACCGCAGGATGCACCCTTTTTCCGGAGTTCTGGCTTGCCTTTCTTCACAGTGGCCATCACCATGTCCCCCACACCTGCCGCCGGCAGCCTGTTCAGACGGCCCTTGATGCCCTTCACGGAGATGATGTACAGGTTCTTTGcacctgagagggagagagaggccgTCAGGGACAGAGTGAAGACTGATCCCCGCAGGCAGTCTGACCCAGGCCTGCAACAGGATTTACACAACTAAGTCATTTCATTCACGCGTTTCAATGTAAGCAACAGCTACAATATTGgtcttttccttttattataaCCTGGGAGAATTGCATGTGAATCTTAAAGGATACACAGACAAAACTGgatcttaaaacaaaatcccaaagGTCCTGGGGTAGAGCATTGTTAAAGCTCCGGGGCATGCAGACGGAACAAGCCCCGGCCTGCACCTCCGCCAGCGACCCACTGAGGTCAGCACTACACACAGGGGCAGCGCAGGGCGGCAGTGTCGCACCGCGGATTGAGAATGTACAGCACATGTTGCCGCCTCCTCACCCAACAGCGATGCGCTTCATGTGCCCTTCCACGACAACTCACCGAGCCACTGATCACAGGCGAAGCAAGTGCTTTTTAGAAGGGGGAGATCACAACAAGGGGACCAGACTGCCACTACACTGCAGCTGCATTATTTTCAGATGGCAGGAGATTATAGGAGCACTTGGTGGCTCCAAGAGAGTCCTGAAAGGTCTCGCGTGACTACAAGTGTGACACCAAGACCCCTCTCTGATACAATATCAGcccggggaggggggggttgcTCACCTGTGTTGTCAGCGCAGTTGATCACAGCCCCCACTGGGAGACCCAGTGAGATGCGAAACTTCGCACCGGACGAACCACCACGTCCTGTagagaaaagggagagagatatTATTGCCAGTTCTGAGCCCAGATACCAGCTTGATTCCCACACCATGCGGTCCAGCCCGGCCCAAACAGTCACTCCACCCGGCCTACGATCCCAATATCCCATACACTCTGCTTAAGGAGAACTTCTTGACTGGAAGTTTCAGCAGCCTGCCCAAAAAGAGTATTGTGGCTGATTAGTCCTGCTCACTACCATTATTTCGTAGTAGAGGACTTACATTTGTTACCATTACCCATTAATACAGCAGAGTTAactggagtaatctaggtagtgccttgctcaagggttcAACAGCAGGTCGCCCAcatgggattgaacccacgaccctccacTCAGCAGTCCTAaccacactccacactgctgcctgtacataaatatctgaaatacataaataaacagcactCGTCTCAGCACTGTACTGGTAAAGTGCACACGCACATGCGCAATACAGGACAGCAGGGGTCATGTACAAAAACGCGTCAAGTCCTTACCTCTAAaatgcaccccccaccccgatGCACCGCAGAGCTGCTAATCGGTCCGCCCGGACCCTGAAGCAACGACACTAAACACACACTTCACTACATATCCAAACTGCACTAATTACAACAGTGTAAACAGACAGCGCCACGTTTTAACAGTGTACAATACCACTATCAAATGCTTAAACCTAAACTAGACAATCGAGGCCGGATGCAAAATGTACGGCACTAACCAAACAAGATGAAATAAACTAAGCATCCCTCGTGTTGCAGAGGCCGGAGATGTCGCGTCTATTCCCAGCTTCAGGACTCCCACTCGCAGCCCTACCTCCCGGAGACAGTACGAGCGACTACCGCCTGTCCACTCAGCACAGTAAAGACACCACAGCCGGGCCCCTGTTTTTATATGCATCGGTGGCTACTACCATTTTAACAAGCCCTCCAGCTTAGGCCACAACACCCGAGACATTCTGATATGCATTCAACATGGCGGCCCACAGACGGGACCGCTGTGCTAAAACATCATAAATCTTCGTCTGTTAGTTTTACAAATGAAATACGCAGCACCTGTGAGCGGACAGacattgttttgattaaacTCAGTGTCTGCGAGCCCCCACTGGTCCCGAGATTCGAGGATGCCGGGGGATTGTTTTCTCTCGGTGCGGACATCGCTTACCTCTCTTAGACATGTCGGTTCACG
>TU18227
GACATTTTGGCCAGAACCAGTTTTATTGGGTTTGTACAAACagggcagggtgggggggtcaggCAATGCTGCCCGCATTGGAGGCAATCCTGGGCCAGAGGTCCGCACACTCCTTAGCCACAGGACCCGTGATGGCcgagcctgagagagagagggggagagagttcATTATGTGGAACACAAAGGTCTGCTGCAGCTTCAGGCACACGTCAACGATCCTGAGAAACATGTATAAACTAATATACGCCTGTCTGAACCGTGCCCTACAATGTACAGTTATCACTGCGGCGCTCCCTGCATTTGCATGAGTTACTGTAACCGTGTAAAAACTTGCACCCATACACCAGCACTCATGTGGCGTTGTGTATAATGCACCACATACGGACTAAACAGCATTCAGATTCTGGTAAACCCAAtagttatatatacaaaaataaaactaatttgatCTGATGCCTTTCAGGACATGATTCTAACAGCCACAATCACATTCTCTTTGGGGGGGTTAAATCAAGTACAATCACACGACTGCAGCTCCAGCAGACCGCAGGCCAGCACTACACACAGGGGCAGCGCAGGGCGGCAGTGTCGCACCGCGGATTGAGAATGTACAGCACATGTTGCCGCCTCCTCACCCAACAGCGATGCGCTTCATGTGCCCTTCCACGACAACTCACCGAGCCACTGATCACAGGCGAAGCAAGTGCTTTTTAGaagggggggggcgggggtgtaCATGATTGCAGTTCAGACTCACCTTTCATCTCCCCTTTGTTGTTGACTATAACCCCTGCGTTGTCTTCGAAGTACAGGAACACCCCGTCTTTCCTCCGGTAGGATTTCCGCTGCCGTATCACTACCGCAGGATGCCTTTTTCCGGAGTTCTGGCTTGCCTTTCTTCACAGTGGCCATCACCATGTCCCCCACACCTGCCGCCGGCAGCCTGTTCAGACGGCCCTTGATGCCCTTCACGGAGATGATGTACAGGTTCTTTCACCTGTGTTGTCAGCGCAGTTGATCACAGCCCCCACTGGGAGACCCAGTGAGATGCGAAACTTCGCACCGGACGAACCACCACGTCTCTCTTAGACATGTCGGTTCACG
>TU18228
GACATTTTGGCCAGAACCAGTTTTATTGGGTTTGTACAAACagggcagggtgggggggtcaggCAATGCTGCCCGCATTGGAGGCAATCCTGGGCCAGAGGTCCGCACACTCCTTAGCCACAGGACCCGTGATGGCcgagcctgagagagagagggggagagagttcATTATGTGGAACACAAAGGTCTGCTGCAGCTTCAGGCACACGTCAACGATCCTGAGAAACATGTATAAACTAATATACGCCTGTCTGAACCGTGCCCTACAATGTACAGTTATCACTGCGGCGCTCCCTGCATTTGCATGAGTTACTGTAACCGTGTAAAAACTTGCACCCATACACCAGCACTCATGTGGCGTTGTGTATAATGCACCACATACGGACTAAACAGCATTCAGATTCTGGTAAACCCAAtagttatatatacaaaaataaaactaatttgatCTGATGCCTTTCAGGACATGATTCTAACAGCCACAATCACATTCTCTTTGGGGGGGTTAAATCAAGTACAATCACACGACTGCAGCTCCAGCAGACCGCAGGCCAGCACTACACACAGGGGCAGCGCAGGGCGGCAGTGTCGCACCGCGGATTGAGAATGTACAGCACATGTTGCCGCCTCCTCACCCAACAGCGATGCGCTTCATGTGCCCTTCCACGACAACTCACCGAGCCACTGATCACAGGCGAAGCAAGTGCTTTTTAGaagggggggggcgggggtgtaCATGATTGCAGTTCAGACTCACCTTTCATCTCCCCTTTGTTGTTGACTATAACCCCTGCGTTGTCTTCGAAGTACAGGAACACCCCGTCTTTCCTCCGGTAGGATTTCCGCTGCCGTATCACTACCGCAGGATGCCTTTTTCCGGAGTTCTGGCTTGCCTTTCTTCACAGTGGCCATCACCATGTCCCCCACACCTGCCGCCGGCAGCCTGTTCAGACGGCCCTTGATGCCCTTCACGGAGATGATGTACAGGTTCTTTCACCTGTGTTGTCAGCGCAGTTGATCACAGCCCCCACTGGGAGACCCAGTGAGATGCGAAACTTCGCACCGGACGAACCACCACGTCCTGTagagaaaagggagagagatatTATTGCCAGTTCTGAGCCCAGATACCAGCTTGATTCCCACACCATGCGGTCCAGCCCGGCCCAAACAGTCACTCCACCCGGCCTACGATCCCAATATCCCATACACTCTGCTTAAGGAGAACTTCTTGACTGGAAGTTTCAGCAGCCTGCCCAAAAAGAGTATTGTGGCTGATTAGTCCTGCTCACTACCATTATTTCGTAGTAGAGGACTTACATTTGTTACCATTACCCATTAATACAGCAGAGTTAactggagtaatctaggtagtgccttgctcaagggttcAACAGCAGGTCGCCCAcatgggattgaacccacgaccctccacTCAGCAGTCCTAaccacactccacactgctgcctgtacataaatatctgaaatacataaataaacagcactCGTCTCAGCACTGTACTGGTAAAGTGCACACGCACATGCGCAATACAGGACAGCAGGGGTCATGTACAAAAACGCGTCAAGTCCTTACCTCTAAaatgcaccccccaccccgatGCACCGCAGAGCTGCTAATCGGTCCGCCCGGACCCTGAAGCAACGACACTAAACACACACTTCACTACATATCCAAACTGCACTAATTACAACAGTGTAAACAGACAGCGCCACGTTTTAACAGTGTACAATACCACTATCAAATGCTTAAACCTAAACTAGACAATCGAGGCCGGATGCAAAATGTACGGCACTAACCAAACAAGATGAAATAAACTAAGCATCCCTCGTGTTGCAGAGGCCGGAGATGTCGCGTCTATTCCCAGCTTCAGGACTCCCACTCGCAGCCCTACCTCCCGGAGACAGTACGAGCGACTACCGCCTGTCCACTCAGCACAGTAAAGACACCACAGCCGGGCCCCTGTTTTTATATGCATCGGTGGCTACTACCATTTTAACAAGCCCTCCAGCTTAGGCCACAACACCCGAGACATTCTGATATGCATTCAACATGGCGGCCCACAGACGGGACCGCTGTGCTAAAACATCATAAATCTTCGTCTGTTAGTTTTACAAATGAAATACGCAGCACCTGTGAGCGGACAGacattgttttgattaaacTCAGTGTCTGCGAGCCCCCACTGGTCCCGAGATTCGAGGATGCCGGGGGATTGTTTTCTCTCGGTGCGGACATCGCTTACCTCTCTTAGACATGTCGGTTCACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18225 False 2336 TUCP 0.52 3 26181744 26184778
TU18226 True 2956 TUCP 0.51 2 26181744 26184778
TU18227 False 1104 lncRNA 0.52 4 26181744 26184778
TU18228 False 2288 lncRNA 0.33 3 26181744 26184778

Neighbor

gene id symbol gene type direction distance location
AMCG00016615 NA coding downstream 26294 26151611 ~ 26155450 (-)
AMCG00016614 NA coding downstream 64294 26104916 ~ 26117450 (-)
AMCG00016601 neurod2,LOC102791336,LOC102193051,LOC101464503 coding downstream 355898 25824746 ~ 25825846 (-)
AMCG00016599 med1 coding downstream 455197 25706081 ~ 25726547 (-)
AMCG00016600 fbxl20,LOC107727724,LOC107666314,LOC107665129,LOC107549884,LOC107563017 coding downstream 478417 25676569 ~ 25703327 (-)
AMCG00016624 LOC107733370 coding upstream 27608 26212386 ~ 26215060 (-)
AMCG00016629 LOC108438403 coding upstream 120137 26304915 ~ 26309363 (-)
AMCG00016628 NA coding upstream 154715 26339493 ~ 26343614 (-)
AMCG00016627 NA coding upstream 188241 26373019 ~ 26374602 (-)
AMCG00016630 eif1b,LOC105888686,LOC107549864,LOC103043673 coding upstream 195270 26380048 ~ 26381729 (-)
G14650 NA non-coding downstream 82772 26097728 ~ 26098972 (-)
G14585 NA non-coding downstream 159481 25971786 ~ 26022263 (-)
G14587 NA non-coding downstream 202181 25973534 ~ 25979563 (-)
G14578 NA non-coding downstream 260196 25918030 ~ 25921548 (-)
G14517 NA non-coding downstream 506544 25672304 ~ 25675200 (-)
G14723 NA non-coding upstream 90399 26275177 ~ 26303459 (-)
G14765 NA non-coding upstream 210154 26394932 ~ 26395425 (-)
G14775 NA non-coding upstream 240254 26425032 ~ 26425250 (-)
G14818 NA non-coding upstream 245677 26430455 ~ 26468099 (-)
G14832 NA non-coding upstream 338026 26522804 ~ 26523047 (-)
AMCG00016616 sp6,LOC102212756,LOC101463567,LOC100707362,LOC107396441,LOC106564946,LOC103384358 other downstream 21822 26156521 ~ 26159922 (-)
AMCG00016617 NA other downstream 32201 26147510 ~ 26149543 (-)
G14637 NA other downstream 98577 26081503 ~ 26083167 (-)
G14534 NA other downstream 427272 25752995 ~ 25754472 (-)
AMCG00016591 NA other downstream 761373 25413316 ~ 25420371 (-)
AMCG00016623 NA other upstream 54304 26239082 ~ 26241390 (-)
G14816 LOC108438405,LOC108438407,LOC107666325,LOC107563033,LOC107666324,LOC107753907 other upstream 242561 26427339 ~ 26520397 (-)
G14843 NA other upstream 383891 26568669 ~ 26571641 (-)
AMCG00016643 NA other upstream 397748 26582526 ~ 26592300 (-)
AMCG00016644 NA other upstream 441929 26626707 ~ 26643493 (-)

Expression


Co-expression Network