Gene
RNA
| Item | Value |
|---|---|
| gene id | G14992 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 27262890 ~ 27274297 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0021591 | ventricular system development | biological_process |
| GO:0021592 | fourth ventricle development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU18626 | True | 896 | lncRNA | 0.49 | 2 | 27262890 | 27274297 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016660 | NA | coding | upstream | 253149 | 26999267 ~ 27009741 (+) |
| AMCG00016661 | nfe2l1 | coding | upstream | 272577 | 26977195 ~ 26990313 (+) |
| AMCG00016655 | NA | coding | upstream | 344122 | 26911968 ~ 26918768 (+) |
| AMCG00016654 | NA | coding | upstream | 365356 | 26893279 ~ 26897534 (+) |
| AMCG00016650 | NA | coding | upstream | 393709 | 26857718 ~ 26869181 (+) |
| AMCG00016668 | NA | coding | downstream | 84481 | 27358778 ~ 27364948 (+) |
| AMCG00016677 | NA | coding | downstream | 119661 | 27393958 ~ 27403922 (+) |
| AMCG00016680 | NA | coding | downstream | 131111 | 27405408 ~ 27405728 (+) |
| AMCG00016676 | atp5g1,LOC107740625,LOC106600830 | coding | downstream | 132434 | 27406731 ~ 27409921 (+) |
| AMCG00016678 | NA | coding | downstream | 139913 | 27414210 ~ 27416010 (+) |
| G14803 | NA | non-coding | upstream | 547089 | 26715569 ~ 26715801 (+) |
| G14802 | NA | non-coding | upstream | 549761 | 26712231 ~ 26713129 (+) |
| G14800 | NA | non-coding | upstream | 557686 | 26704997 ~ 26705204 (+) |
| G14791 | NA | non-coding | upstream | 605572 | 26589606 ~ 26657318 (+) |
| G14793 | NA | non-coding | upstream | 629698 | 26626707 ~ 26633192 (+) |
| G15005 | hoxb7a,hxb7a,hoxb7,hoxb7ab | non-coding | downstream | 7127 | 27281424 ~ 27282569 (+) |
| G15025 | NA | non-coding | downstream | 95292 | 27369589 ~ 27370138 (+) |
| G15224 | NA | non-coding | downstream | 842621 | 28116918 ~ 28117190 (+) |
| G15226 | NA | non-coding | downstream | 844246 | 28118543 ~ 28119649 (+) |
| G15253 | NA | non-coding | downstream | 886368 | 28160665 ~ 28160887 (+) |
| AMCG00016663 | NA | other | upstream | 268942 | 26966297 ~ 26993948 (+) |
| AMCG00016635 | NA | other | upstream | 605465 | 26600093 ~ 26657425 (+) |
| AMCG00016638 | krt222 | other | upstream | 714678 | 26527319 ~ 26548212 (+) |
| AMCG00016640 | NA | other | upstream | 763648 | 26489938 ~ 26499242 (+) |
| AMCG00016633 | NA | other | upstream | 829234 | 26427339 ~ 26433656 (+) |
| AMCG00016683 | NA | other | downstream | 268189 | 27542486 ~ 27553120 (+) |
| AMCG00016691 | NA | other | downstream | 314182 | 27588479 ~ 27604879 (+) |
| AMCG00016690 | NA | other | downstream | 338808 | 27613105 ~ 27626090 (+) |
| AMCG00016699 | LOC106607176 | other | downstream | 503130 | 27777427 ~ 27799126 (+) |
| AMCG00016705 | NA | other | downstream | 554971 | 27829268 ~ 27833537 (+) |
