G15025


Basic Information

Item Value
gene id G15025
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27369589 ~ 27370138 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18672
TGTCATGTCATGagaatttattatataaatctatatggacagatttgtaaaaaatatattaatcccCTTTCCAAAACCCGAGCAGAGAAGCAACATACGAGTTTCCAACCAcctgaggatttttttttttcatttgtaaaaatgtatttatatactttaaGGATATAGAATATAATAAGCTGATATGTATTTTAAGGAAGAATAAAATCAGACCGTATTGATGGGATCGTATGTGGCTGAGAATCCCCTCTTTGGCCAACGGGCGGTGGTGCAAGCTACGCAGTGTGGGCCGGTCTGTCAGAGACGCAGAGCTGTCCCAATCAGGGCCACAGAGCCCGGCCTGTCCCCGAGGACAGGGTCCACTGTACACAGTCCTGTCTGCAACAGGCAGTGAACAGAACCAGCAGGCCTTGATGTCAGTGTGACTCTTCGTCTTCCTGGGCctgcagaccctcatctctccgaCCTCAAGGCTGatgaacacacagacacccctgTGTTAGCTGAGAGGAGCATCACACAGACAGCACCATCAAGGACAGACaccacc

Function

GO:

id name namespace
GO:0007399 nervous system development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18672 True 550 lncRNA 0.40 1 27369589 27370138

Neighbor

gene id symbol gene type direction distance location
AMCG00016668 NA coding upstream 4641 27358778 ~ 27364948 (+)
AMCG00016660 NA coding upstream 359848 26999267 ~ 27009741 (+)
AMCG00016661 nfe2l1 coding upstream 379276 26977195 ~ 26990313 (+)
AMCG00016655 NA coding upstream 450821 26911968 ~ 26918768 (+)
AMCG00016654 NA coding upstream 472055 26893279 ~ 26897534 (+)
AMCG00016677 NA coding downstream 23820 27393958 ~ 27403922 (+)
AMCG00016680 NA coding downstream 35270 27405408 ~ 27405728 (+)
AMCG00016676 atp5g1,LOC107740625,LOC106600830 coding downstream 36593 27406731 ~ 27409921 (+)
AMCG00016678 NA coding downstream 44072 27414210 ~ 27416010 (+)
AMCG00016679 NA coding downstream 55542 27425680 ~ 27427034 (+)
G15005 hoxb7a,hxb7a,hoxb7,hoxb7ab non-coding upstream 87020 27281424 ~ 27282569 (+)
G14992 NA non-coding upstream 95292 27262890 ~ 27274297 (+)
G14803 NA non-coding upstream 653788 26715569 ~ 26715801 (+)
G14802 NA non-coding upstream 656460 26712231 ~ 26713129 (+)
G14800 NA non-coding upstream 664385 26704997 ~ 26705204 (+)
G15224 NA non-coding downstream 746780 28116918 ~ 28117190 (+)
G15226 NA non-coding downstream 748405 28118543 ~ 28119649 (+)
G15253 NA non-coding downstream 790527 28160665 ~ 28160887 (+)
G15270 NA non-coding downstream 855704 28225842 ~ 28230979 (+)
G15328 NA non-coding downstream 1064846 28434984 ~ 28435256 (+)
AMCG00016663 NA other upstream 375641 26966297 ~ 26993948 (+)
AMCG00016635 NA other upstream 712164 26600093 ~ 26657425 (+)
AMCG00016638 krt222 other upstream 821377 26527319 ~ 26548212 (+)
AMCG00016640 NA other upstream 870347 26489938 ~ 26499242 (+)
AMCG00016633 NA other upstream 935933 26427339 ~ 26433656 (+)
AMCG00016683 NA other downstream 172348 27542486 ~ 27553120 (+)
AMCG00016691 NA other downstream 218341 27588479 ~ 27604879 (+)
AMCG00016690 NA other downstream 242967 27613105 ~ 27626090 (+)
AMCG00016699 LOC106607176 other downstream 407289 27777427 ~ 27799126 (+)
AMCG00016705 NA other downstream 459130 27829268 ~ 27833537 (+)

Expression


Co-expression Network