G15076


Basic Information

Item Value
gene id G15076
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27424893 ~ 27428651 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18749
CACGCTAGAGCACGTTCTTGCACAGATGTCAGATTAAATATACAGATGTAAaaactatatgtatataaatatttttatttttctcaaccCAACACTGAGTTCTTGCACATACCCCCATCTGTATGTTGTggattacttttttccctttaaccCTTTAAAATGCAACAGCAACAAGGAACATAAACAGGTTTACAGCTGCCTCCAGCAACCAGCCTGGGATGGGGAGGGGCACTCCAGAGCAGACACGCATCTTCTGATTCTGTTTGGCTTTTGACTTGACAGACCAGTGAATGTCCAGCATAAATGAGATTTGTATGTTGACAGACTTTCTTTATTAtccttataattattttacaaaaaaaaaaaaaagtcaaggtGTACCGGGAGGTAATGAACAGCGGTCCTGGGGAGAAACCTGGACACCCcaaacacagagaaatataGAGTAATAAAGCCCAATGATCAATGGGCTCAATTAAACATCAGGATATAAGAAATCCCAGTGgtcctgccccccaccccagcgGTACTCCCAGGTGCTGAGGAGGTAAAGCCACAGTGGGGGAGTAGCTCCTCCAGCACAGCTCAACGGCTGCACTCACCCTCCCCGTACATCAACAacgaaaaaaaaacacacgctGTACAAAAGGCtacgaaacaaaaacaaaaaacatctgcagaaaTCGAAAAGGCACAGAATTGGAGGTCAGCTCtaatattcaaaacaaaaagaaacaaaacacatacacaaaagtACACATACAAGTATCATATGAAAGCAAGGCGTTGAGGTTTGCTAGTGTCAGTGGCCCTGCGTCTGTGTTGGGGAGAAGTCCGCAGTGTgtcacagtaaaacaaacaaggaaaaacaagtgTCCTCAGTCCGCCTGCATCAAAAAGCCCCCGCTGCACCCCCGCCATGCAACCCCGCCTGGTGCACTGCGGGCAGAACTGCAGTCCAGCTACTCAACATAACAGTcaagatttttaaattatttaattttgcagacCATGTAAGCTTGGGTTATATGGCTTTTTGTCTGGGAGTAGGGGGTGAGGGAGACTCTCACCCCCAAAGGTACGTCCAAGCTGTCAAAGGTTCAGAAAACTCCCCCACCTCAACCCCCCACAAACACTAAAATACCCAAAACATGGTCGAAAGACTGAGGGAAAGGGCCCAGACAGAGAGGAGCCCCCACTGTGGGAGTGTTGGGGGGGTATCATCCTTCCAGAATGGTGCAAAAGGGTTCCAGAGCACCCACGCTGAGAGACCACACAAAAAGGGGGGGGGATCCTGCAGCCAAACCTCCACACAGTTTTTGCACAGTCCTGCACTGTGGTCAGGCCTCCCTTTGCCAccaccacaaaataaaacacaaatattacaaataaacagaGTCTGTATTCACCTGGGACAAGGCCAGACAGAAATCAAGCCAGAGACGACAGGACGGAGATCGGAAAGAGGTTGGCTGGGACTGCCAAGCCACACTGCCGAGGGAACGAGCGATTTCCTCTCCGGTGTTTGTGTGGGGGAGGTACCACCTCTAAAGACCAGTCAGAGGTGGGTCCGAACGTGGCTTTAGGCAGCCCAGCTCCTCCGGGCTCAGCGAGGGGAGGTTCTGAGCGAGTCTTCTGGTCTCTTTTCTTTGCGAGCGTGTGCCTGTGTGTAAACGGCAGACCACGACAATTGCACATTCGGGCAGGTCAGcgttttcttttcctcccccAGCGAGCCGGCCCGTCGAGTCTCCCGCCTTTTTGTGGGCCAAAGCCAGGCTGCCCTGGCGCCGGGCTGGTCGGGGCTCTGTCTCCAGTGACACGCGCCGCTGCCGGCTGCACCGCGATGGAGTTGTGTGGCAGGCAGCTCTGGGCACCTGGAACCACAAGGATCTTTTGAAGCCCTGGACCGCAAAAGGTCTTTAAATAGCGAAAATTAAGTCATGCGATTAATTTGATGCAACCACCAGCCTGTAGTTCAGTCATAGAGAGGCGCTCCAGAAGTAGAAGGGAATGCAGCCCCCTCCGGGAACTGACCCGGGCTACGGCCCACCCCCCGGGACTGCTGGCTCAGGGGAGGGACCGGGAGTGACATGGCGCTTTTGGCGTCCTAGTGCTTTAATCACAGGGAGTCTCCACGCCCCGACCAATCAGCAGTCTGATATCACTGAGATGTGGCCTCCTTTTGAGTTTACCTTAAGGCATTGTTCAATTATTTCCTTTACTACAAAAAACGGCTCTGGTACAACagaaattagtattatttaaatctttacaataaacttttttattttttgcattttttatcattgtattttttatcttttataaaTCGATAAAGATAGGATTTGGTCATTGTTAGGaatccaacaacaaaaaacaaatcgtaatcaaaaaaaatcataacataGTAGAAATGTGTCGGCCTCTGTTCCTCTCTCCATTAAAGAGATCTGTCAACAGCCCCCTCAGGACTCACCCTGGCGTTTAACTCTACATTGGATGTTGGAGGGATTTGCTCTTTGGTTTGTGATGAAATCACCATCAAAGCCTCCGTCTTTCCCCTGGTTAGACAGGGACAGCTTGCCGGTCTCAGGTCTGTGTCCAGCTCTGTGTCCAGCTCCGGGTCCCCCTGTGGCCCAGTGCAGCGCTCCACGTGTCCCCCCCCGGAAGCACAGTGCTGGCAGATCCACGGCTGCGTGCCGATGCTGGGCCCACATAAAACAGCACCTTAGCTGGAACAGGGAGCAGCCGGGGTAGCGCTGCAGGGACTGTGATGGGAGCATCCCACAGCCCGCCGCCGCCccaatccacacacacacacggggacTGACTGGACACCAATTTCGGGGACGTCTCTCAGTACAGAAAGCTTCCAGAAAGACCGGCAGCTGGGTAGCATCCCAGTCTatttcctcctccctctcctctctccggGTCTCACACTCACTTTCCAGGATGCCAGGGATGGGGGCGGGGAAAGGGCTGGGGTGGGGCTGGGTTGGAGTTCTAGAATAATGCCCACCAATTCCAGAATCCTTCTAGGGCTCGTCTGTGTCACTGatgatgtttttgtatttaattctgatctctttctctctctttatatatatttttatatatatattctttttataattattttatttacattttccactCCAATCCCTCTATCCCTGtttaagaagagaaaaaaacaaaacagaaaaacaaactaggggaaaacgaaacaaaaaaaatattttaaaacccattctctgtcttcctctattattattattttttttacatcattaaTTTTATTCTAAACACCCCCCCccgggaaaaaaacaaacaaaaaaaacaaacaaacaaacaaaccctgcTTCAAAAAACAGAAGCGTCCTAAAGggttgttttctattttttgttcctTCTTTTTCTCGAAGCGTACAGAGCACAGGCTGCTTcgtcgggggggtgggggggtgacgAGGCGAAGGGTGGCTGCCCCAGCCTGGCTCCTGTGAGGCCTATGGCTTGGAGCTTCCCTGGCTGTCGGGGTCGGTGCCTGAGGAGCTGCTGTCCGAGTCCGTGTCggcctctccctcctccagggGCAGCTTCTCCCGGAGTCGCTGCTGGATGCTCTGCAGGCGGGACAGCAGGGCCTGATAGTCAAAGTGGCCCCTCTTCTCCCCAAAGGGGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18749 True 3689 TUCP 0.36 2 27424893 27428651

Neighbor

gene id symbol gene type direction distance location
AMCG00016675 ttll6,LOC107582749,LOC107727303,LOC107666932 coding downstream 43805 27375965 ~ 27381088 (-)
AMCG00016670 LOC106579309 coding downstream 49193 27370979 ~ 27375700 (-)
AMCG00016669 hoxb13aa,hoxb13ab,hoxb13 coding downstream 85300 27338007 ~ 27339593 (-)
AMCG00016672 hoxb9ab,hoxb9,hoxb9a,LOC106600835 coding downstream 111720 27299603 ~ 27313173 (-)
AMCG00016673 hoxb8,hoxb8ab,hoxb8aa coding downstream 134032 27286874 ~ 27290861 (-)
AMCG00016681 snf8,LOC107734219,LOC107692042,LOC107554070,LOC107584075,LOC107660854 coding upstream 1451 27430102 ~ 27433860 (-)
AMCG00016688 nr1d1,LOC102302421 coding upstream 80994 27509645 ~ 27516973 (-)
AMCG00016692 NA coding upstream 214988 27643639 ~ 27650849 (-)
AMCG00016693 LOC107388104 coding upstream 227097 27655748 ~ 27669412 (-)
AMCG00016694 LOC105013104 coding upstream 272361 27701012 ~ 27707529 (-)
G15075 NA non-coding downstream 72 27424554 ~ 27424821 (-)
G15074 NA non-coding downstream 8354 27416249 ~ 27416539 (-)
G15073 NA non-coding downstream 9001 27415653 ~ 27415892 (-)
G15071 NA non-coding downstream 11664 27413000 ~ 27413229 (-)
G15066 NA non-coding downstream 26310 27395119 ~ 27398583 (-)
G15079 NA non-coding upstream 106674 27535325 ~ 27541840 (-)
G15095 NA non-coding upstream 121661 27550312 ~ 27553162 (-)
G15165 NA non-coding upstream 365941 27794592 ~ 27794980 (-)
G15166 NA non-coding upstream 368132 27796783 ~ 27797008 (-)
G15172 NA non-coding upstream 373478 27802129 ~ 27805042 (-)
G15067 NA other downstream 20971 27401676 ~ 27403922 (-)
G15026 NA other downstream 54754 27369590 ~ 27370139 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other downstream 145559 27265887 ~ 27279334 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other downstream 421186 26995173 ~ 27003707 (-)
AMCG00016644 NA other downstream 781400 26626707 ~ 26643493 (-)
AMCG00016712 NA other upstream 701361 28130012 ~ 28157200 (-)
AMCG00016732 NA other upstream 1352821 28781472 ~ 28785507 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other upstream 1773221 29201872 ~ 29225587 (-)
G15706 NA other upstream 2772808 30201459 ~ 30202351 (-)
G15787 NA other upstream 3097641 30526292 ~ 30529500 (-)

Expression


Co-expression Network