Gene
RNA
| Item | Value |
|---|---|
| gene id | G15165 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 27794592 ~ 27794980 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU18848 | True | 389 | lncRNA | 0.55 | 1 | 27794592 | 27794980 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016695 | NA | coding | downstream | 56163 | 27732315 ~ 27738429 (-) |
| AMCG00016694 | LOC105013104 | coding | downstream | 87063 | 27701012 ~ 27707529 (-) |
| AMCG00016693 | LOC107388104 | coding | downstream | 125180 | 27655748 ~ 27669412 (-) |
| AMCG00016692 | NA | coding | downstream | 143743 | 27643639 ~ 27650849 (-) |
| AMCG00016688 | nr1d1,LOC102302421 | coding | downstream | 277619 | 27509645 ~ 27516973 (-) |
| AMCG00016700 | NA | coding | upstream | 11369 | 27806349 ~ 27809112 (-) |
| AMCG00016701 | tmem101 | coding | upstream | 45215 | 27840195 ~ 27842668 (-) |
| AMCG00016709 | NA | coding | upstream | 196667 | 27991647 ~ 27997674 (-) |
| AMCG00016713 | NA | coding | upstream | 297264 | 28092244 ~ 28107936 (-) |
| AMCG00016714 | NA | coding | upstream | 352847 | 28147827 ~ 28148678 (-) |
| G15095 | NA | non-coding | downstream | 241430 | 27550312 ~ 27553162 (-) |
| G15079 | NA | non-coding | downstream | 252752 | 27535325 ~ 27541840 (-) |
| G15075 | NA | non-coding | downstream | 369771 | 27424554 ~ 27424821 (-) |
| G15074 | NA | non-coding | downstream | 378053 | 27416249 ~ 27416539 (-) |
| G15073 | NA | non-coding | downstream | 378700 | 27415653 ~ 27415892 (-) |
| G15166 | NA | non-coding | upstream | 1803 | 27796783 ~ 27797008 (-) |
| G15172 | NA | non-coding | upstream | 7149 | 27802129 ~ 27805042 (-) |
| G15169 | lsm12,LOC107708984,LOC101168777,LOC107562026,LOC107693683 | non-coding | upstream | 15658 | 27810638 ~ 27815464 (-) |
| G15200 | NA | non-coding | upstream | 88659 | 27883639 ~ 27884430 (-) |
| G15201 | NA | non-coding | upstream | 90106 | 27885086 ~ 27886560 (-) |
| G15076 | NA | other | downstream | 365941 | 27424893 ~ 27428651 (-) |
| G15067 | NA | other | downstream | 390670 | 27401676 ~ 27403922 (-) |
| G15026 | NA | other | downstream | 424453 | 27369590 ~ 27370139 (-) |
| AMCG00016671 | hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 | other | downstream | 515258 | 27265887 ~ 27279334 (-) |
| AMCG00016662 | cbx1,cbx1b,LOC108279860 | other | downstream | 790885 | 26995173 ~ 27003707 (-) |
| AMCG00016712 | NA | other | upstream | 335032 | 28130012 ~ 28157200 (-) |
| AMCG00016732 | NA | other | upstream | 986492 | 28781472 ~ 28785507 (-) |
| AMCG00016740 | ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 | other | upstream | 1406892 | 29201872 ~ 29225587 (-) |
| G15706 | NA | other | upstream | 2406479 | 30201459 ~ 30202351 (-) |
| G15787 | NA | other | upstream | 2731312 | 30526292 ~ 30529500 (-) |
