G15166


Basic Information

Item Value
gene id G15166
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 27796783 ~ 27797008 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18849
GGGGGGTTTACAGACCAGCAACTGGGAAGAGACGAGTGTGGCCGATCATCAGTCATGCAATAACGAGCTGCGGCCGTACCTGCTGGGCTGGTGGCCGGCGGCCTGCTCGGtgtccacagagagagaggccatGGCGCTGACCGTCTCGGCCTCCTCGGTCTCCCGGCGCTGCGCCTCCAGCAGGGACAGGGCCACGGTGGGGGCGAACCTCTGCACCGAGCTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18849 True 226 lncRNA 0.67 1 27796783 27797008

Neighbor

gene id symbol gene type direction distance location
AMCG00016695 NA coding downstream 58354 27732315 ~ 27738429 (-)
AMCG00016694 LOC105013104 coding downstream 89254 27701012 ~ 27707529 (-)
AMCG00016693 LOC107388104 coding downstream 127371 27655748 ~ 27669412 (-)
AMCG00016692 NA coding downstream 145934 27643639 ~ 27650849 (-)
AMCG00016688 nr1d1,LOC102302421 coding downstream 279810 27509645 ~ 27516973 (-)
AMCG00016700 NA coding upstream 9341 27806349 ~ 27809112 (-)
AMCG00016701 tmem101 coding upstream 43187 27840195 ~ 27842668 (-)
AMCG00016709 NA coding upstream 194639 27991647 ~ 27997674 (-)
AMCG00016713 NA coding upstream 295236 28092244 ~ 28107936 (-)
AMCG00016714 NA coding upstream 350819 28147827 ~ 28148678 (-)
G15165 NA non-coding downstream 1803 27794592 ~ 27794980 (-)
G15095 NA non-coding downstream 243621 27550312 ~ 27553162 (-)
G15079 NA non-coding downstream 254943 27535325 ~ 27541840 (-)
G15075 NA non-coding downstream 371962 27424554 ~ 27424821 (-)
G15074 NA non-coding downstream 380244 27416249 ~ 27416539 (-)
G15172 NA non-coding upstream 5121 27802129 ~ 27805042 (-)
G15169 lsm12,LOC107708984,LOC101168777,LOC107562026,LOC107693683 non-coding upstream 13630 27810638 ~ 27815464 (-)
G15200 NA non-coding upstream 86631 27883639 ~ 27884430 (-)
G15201 NA non-coding upstream 88078 27885086 ~ 27886560 (-)
G15207 col1a1,col1a1a,LOC107662397,LOC100286406,LOC106600852 non-coding upstream 167535 27964543 ~ 27966856 (-)
G15076 NA other downstream 368132 27424893 ~ 27428651 (-)
G15067 NA other downstream 392861 27401676 ~ 27403922 (-)
G15026 NA other downstream 426644 27369590 ~ 27370139 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other downstream 517449 27265887 ~ 27279334 (-)
AMCG00016662 cbx1,cbx1b,LOC108279860 other downstream 793076 26995173 ~ 27003707 (-)
AMCG00016712 NA other upstream 333004 28130012 ~ 28157200 (-)
AMCG00016732 NA other upstream 984464 28781472 ~ 28785507 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other upstream 1404864 29201872 ~ 29225587 (-)
G15706 NA other upstream 2404451 30201459 ~ 30202351 (-)
G15787 NA other upstream 2729284 30526292 ~ 30529500 (-)

Expression


Co-expression Network