G15223


Basic Information

Item Value
gene id G15223
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 28104737 ~ 28105711 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18924
CTGTTCCTGGGAGTGGTCACAGGTGAACAGCGTGTTCCCCTCAGAGTCCACGGAGCTCGACCAGCCTGCTGGTGCCTCCGAGTCGATATTCACCCTGGGCATGATGGCCTTTTTGATTGGGGCGTAGCTGAAGTCTTTTTGAAGCATCACAGGGGAAGCTTCCACTTCTGAAGGGTAGTCCTCCTCAGGCAGGGGGGCGGCCCATGGTCTCGATTGTTGTTCTCTGGCTCCATATCTGTCTCGGAAGGGGAGTGCAGCTCGGGGGGCTCCCAGGACGTGTCTCCAGTGACAGAGTTGTAGAAGTAGTAACGGCCGCTGGCCTCGTCCAGGTGCTGCTCCCAGTCAGAGCCCAGCTCGAAGGGGGCGGGAAGAGTGGGGACGATGGCGGcgggagagggggaaggggagggggagggagatggGGATGGCAGCTCCTCCAGAGTCGCCTCTTGGTCCTCAAAGGGACTCTCCCAGGTGGTCTGTCCTGTGAGCGTGTTGTAGAAGAACTCCTGGCCGCTATCCTTGTCAACGTGCACCTCCCAATCCACAGAGCTGGTGGACAGGGTTCGACGGGCAGGGGGCGGGGCTGGGGTGGTGTCGGGCTCCGCCCTGCCTTTCTTCAGCTCAGCTACGTTGACGTACACTGCAGAGCTGGGGTTCTCACTCTCCACCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18924 True 674 TUCP 0.61 2 28104737 28105711

Neighbor

gene id symbol gene type direction distance location
AMCG00016711 NA coding upstream 14557 28073595 ~ 28090180 (+)
AMCG00016708 LOC106607474,LOC106600853 coding upstream 53706 28040024 ~ 28051031 (+)
AMCG00016710 NA coding upstream 76463 28006284 ~ 28028274 (+)
AMCG00016704 NA coding upstream 216525 27881440 ~ 27888212 (+)
AMCG00016703 NA coding upstream 233551 27862189 ~ 27871186 (+)
AMCG00016720 NA coding downstream 49051 28154762 ~ 28181038 (+)
AMCG00016722 LOC107585102,LOC107694961,LOC107740645,LOC107754315,LOC108230875,LOC107662407,LOC103390188,LOC107374630 coding downstream 174787 28280498 ~ 28286427 (+)
AMCG00016721 NA coding downstream 202891 28308602 ~ 28345826 (+)
AMCG00016728 NA coding downstream 553221 28658932 ~ 28660893 (+)
AMCG00016729 NA coding downstream 559103 28664814 ~ 28681501 (+)
G15025 NA non-coding upstream 734599 27369589 ~ 27370138 (+)
G15005 hoxb7a,hxb7a,hoxb7,hoxb7ab non-coding upstream 822168 27281424 ~ 27282569 (+)
G14992 NA non-coding upstream 830440 27262890 ~ 27274297 (+)
G14803 NA non-coding upstream 1388936 26715569 ~ 26715801 (+)
G14802 NA non-coding upstream 1391608 26712231 ~ 26713129 (+)
G15224 NA non-coding downstream 11207 28116918 ~ 28117190 (+)
G15226 NA non-coding downstream 12832 28118543 ~ 28119649 (+)
G15253 NA non-coding downstream 54954 28160665 ~ 28160887 (+)
G15270 NA non-coding downstream 120131 28225842 ~ 28230979 (+)
G15328 NA non-coding downstream 329273 28434984 ~ 28435256 (+)
AMCG00016707 col1a1,LOC100135784,LOC100286406,LOC106600852,LOC105005744 other upstream 105960 27964578 ~ 27998777 (+)
AMCG00016702 NA other upstream 226040 27872663 ~ 27878697 (+)
AMCG00016706 LOC102299446 other upstream 265634 27836513 ~ 27839103 (+)
AMCG00016705 NA other upstream 271200 27829268 ~ 27833537 (+)
AMCG00016699 LOC106607176 other upstream 305611 27777427 ~ 27799126 (+)
AMCG00016731 NA other downstream 637649 28743360 ~ 28761192 (+)
AMCG00016739 wnt3,LOC103381861,LOC108249203,LOC104961604,LOC104925160,LOC105936264,LOC101174231,LOC100707095,LOC108273758,LOC106589299,LOC101469754 other downstream 1128793 29234504 ~ 29256824 (+)
AMCG00016769 NA other downstream 1916896 30022607 ~ 30107727 (+)
AMCG00016772 g6pc other downstream 1967227 30072938 ~ 30083528 (+)
AMCG00016770 rpl27,LOC106601555,LOC107551168 other downstream 2003888 30109599 ~ 30113284 (+)

Expression


Co-expression Network