G15254


Basic Information

Item Value
gene id G15254
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 28160687 ~ 28160940 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU18959
agcaaatgtcatccaatccacaagaaagaggacaaaactgagccaggaaattacagaccaatcagtctcacctgcatcacttgtaaaatgttggaaaaaatgattagacagaaaatagaggagcatcttaatgaaaaccatattcttggagatagtcaacatgggtttagatgaggcagatcatgtcttactaatttattagaattttttgaacatgtaactgcagctgtagatcatgtgaaagcatatgatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18959 True 254 lncRNA 0.35 1 28160687 28160940

Neighbor

gene id symbol gene type direction distance location
AMCG00016714 NA coding downstream 12009 28147827 ~ 28148678 (-)
AMCG00016713 NA coding downstream 52751 28092244 ~ 28107936 (-)
AMCG00016709 NA coding downstream 163013 27991647 ~ 27997674 (-)
AMCG00016701 tmem101 coding downstream 318019 27840195 ~ 27842668 (-)
AMCG00016700 NA coding downstream 351575 27806349 ~ 27809112 (-)
AMCG00016719 NA coding upstream 35487 28196427 ~ 28209980 (-)
AMCG00016716 NA coding upstream 50904 28211844 ~ 28214306 (-)
AMCG00016715 NA coding upstream 54740 28215680 ~ 28221102 (-)
AMCG00016717 LOC103474271 coding upstream 68835 28229775 ~ 28253184 (-)
AMCG00016718 NA coding upstream 103404 28264344 ~ 28272545 (-)
G15228 NA non-coding downstream 102624 28003239 ~ 28058063 (-)
G15206 col1a1,LOC105005744,LOC107585052,LOC107740634,LOC104944135,LOC103393603,LOC108233705,LOC107582926,LOC102798806 non-coding downstream 172258 27979546 ~ 27988429 (-)
G15207 col1a1,col1a1a,LOC107662397,LOC100286406,LOC106600852 non-coding downstream 193831 27964543 ~ 27966856 (-)
G15201 NA non-coding downstream 274127 27885086 ~ 27886560 (-)
G15200 NA non-coding downstream 276257 27883639 ~ 27884430 (-)
G15291 NA non-coding upstream 123422 28284362 ~ 28286445 (-)
G15330 NA non-coding upstream 290458 28451398 ~ 28451632 (-)
G15364 NA non-coding upstream 520898 28681838 ~ 28682338 (-)
G15365 fam171a2,LOC106600878,LOC106607454 non-coding upstream 534758 28695698 ~ 28695920 (-)
G15448 NA non-coding upstream 905171 29066111 ~ 29066388 (-)
AMCG00016712 NA other downstream 3487 28130012 ~ 28157200 (-)
G15076 NA other downstream 732036 27424893 ~ 27428651 (-)
G15067 NA other downstream 756765 27401676 ~ 27403922 (-)
G15026 NA other downstream 790548 27369590 ~ 27370139 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other downstream 881353 27265887 ~ 27279334 (-)
AMCG00016732 NA other upstream 620532 28781472 ~ 28785507 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other upstream 1040932 29201872 ~ 29225587 (-)
G15706 NA other upstream 2040519 30201459 ~ 30202351 (-)
G15787 NA other upstream 2365352 30526292 ~ 30529500 (-)
AMCG00016815 NA other upstream 3219607 31380547 ~ 31388268 (-)

Expression


Co-expression Network