G15364


Basic Information

Item Value
gene id G15364
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 28681838 ~ 28682338 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU19115
CTCCCACACGTCCACTGGGGCTTTCCCGTCCACAGATCCTTTGTTTCCACACGGTACAGTGGAACAAATCACACGAACACAGCAAGCCTGCGAACAACCCAGCATCTCGCCTCCATTCGTGAGGGGCAATACGAAAATGCGGCTGTTACATAAGAGGGACCCATCCGCTGAATCCTGTAACACTGGGCACCGGTGGCTCAATTGTGGTACCACTGGCCCGAGCATTTGGATGCGCTGTGCCCACTCCCCCGGCTGCAGCCGAGCCCCACTCACCCAGCGCGCTGAGCTCCGGAATGGATTTGGCCACAGCCCTGCCGACGCCGCCGAGCAAGAGGACGAGCAGCAGCAAACGAGAGATGCGCAAAGGTGGCATTGTTACAGCTACATCACTGTTCCCAGCTAGGGAGCCATTCATCCATGTTGTTTTTTAGGGTGGTATAGAGGGGGCTACTCGGTGAACGCCTCTCGCTTGCCAACTCCCCTACACGCTCTCCCTTCGCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19115 True 501 lncRNA 0.58 1 28681838 28682338

Neighbor

gene id symbol gene type direction distance location
AMCG00016727 NA coding downstream 163090 28509826 ~ 28518748 (-)
AMCG00016726 LOC105890724,LOC107754311,LOC108413653,LOC108261365,LOC107694956 coding downstream 189222 28477514 ~ 28492616 (-)
AMCG00016725 cdc27,LOC106600875 coding downstream 261928 28405721 ~ 28419910 (-)
AMCG00016723 NA coding downstream 294146 28386229 ~ 28387692 (-)
AMCG00016724 NA coding downstream 324058 28350369 ~ 28357780 (-)
AMCG00016733 s2540,LOC106601558,LOC108434938 coding upstream 43271 28725609 ~ 28738603 (-)
AMCG00016736 dlx3,dlx3b coding upstream 267112 28949450 ~ 28953796 (-)
AMCG00016738 NA coding upstream 339289 29021627 ~ 29024518 (-)
AMCG00016741 NA coding upstream 509396 29191734 ~ 29201720 (-)
AMCG00016743 nsf,LOC107601245,LOC108260232,LOC107688085 coding upstream 583421 29265759 ~ 29288483 (-)
G15330 NA non-coding downstream 230206 28451398 ~ 28451632 (-)
G15291 NA non-coding downstream 395393 28284362 ~ 28286445 (-)
G15254 NA non-coding downstream 520898 28160687 ~ 28160940 (-)
G15228 NA non-coding downstream 623775 28003239 ~ 28058063 (-)
G15206 col1a1,LOC105005744,LOC107585052,LOC107740634,LOC104944135,LOC103393603,LOC108233705,LOC107582926,LOC102798806 non-coding downstream 693409 27979546 ~ 27988429 (-)
G15365 fam171a2,LOC106600878,LOC106607454 non-coding upstream 13360 28695698 ~ 28695920 (-)
G15448 NA non-coding upstream 383773 29066111 ~ 29066388 (-)
G15525 NA non-coding upstream 578974 29261312 ~ 29264667 (-)
G15585 NA non-coding upstream 1120557 29802895 ~ 29807133 (-)
G15673 psme3,LOC106589310,LOC107706898,LOC107669474 non-coding upstream 1356452 30038790 ~ 30041875 (-)
AMCG00016712 NA other downstream 524638 28130012 ~ 28157200 (-)
G15076 NA other downstream 1253187 27424893 ~ 27428651 (-)
G15067 NA other downstream 1277916 27401676 ~ 27403922 (-)
G15026 NA other downstream 1311699 27369590 ~ 27370139 (-)
AMCG00016671 hoxb6ab,hoxb6,hoxb6a,LOC105013254,LOC103045875,LOC107582892 other downstream 1402504 27265887 ~ 27279334 (-)
AMCG00016732 NA other upstream 99134 28781472 ~ 28785507 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other upstream 519534 29201872 ~ 29225587 (-)
G15706 NA other upstream 1519121 30201459 ~ 30202351 (-)
G15787 NA other upstream 1843954 30526292 ~ 30529500 (-)
AMCG00016815 NA other upstream 2698209 31380547 ~ 31388268 (-)

Expression


Co-expression Network