G15460


Basic Information

Item Value
gene id G15460
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 29211497 ~ 29211718 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU19218
GGGGGGcgcgccccacagtttgggaacctgtGATCTAGTTAATAAGGGGCATTGGAGGAGGGAGGACTCACAGGATGATGGGTGTGATGGTGAGGAACTTTCGAGAGGCGGTGAACTGAACCCCGTAGTCCATCTGCTCCCAGTGAGTGAGGAGGCGAGCCTTGCCCTGGTCAGGGGTCTCAAAGGGGGTTCCCTTCACCGTGTGCAGGAAGATGTACATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19218 True 222 lncRNA 0.58 1 29211497 29211718

Neighbor

gene id symbol gene type direction distance location
AMCG00016737 NA coding upstream 197355 28999661 ~ 29014142 (+)
AMCG00016735 dlx4b,LOC105899934,LOC106600935,LOC106583890,LOC105028424 coding upstream 282307 28918116 ~ 28929190 (+)
AMCG00016734 myst2,LOC107689642,LOC107554133,LOC106607195 coding upstream 434472 28762024 ~ 28777025 (+)
AMCG00016730 NA coding upstream 492831 28682371 ~ 28718666 (+)
AMCG00016729 NA coding upstream 529996 28664814 ~ 28681501 (+)
AMCG00016745 cdk5r1,LOC108426451 coding downstream 116811 29328529 ~ 29329440 (+)
AMCG00016746 NA coding downstream 158040 29369758 ~ 29371719 (+)
AMCG00016747 NA coding downstream 194397 29406115 ~ 29424802 (+)
AMCG00016759 NA coding downstream 446358 29658076 ~ 29662545 (+)
AMCG00016754 NA coding downstream 450961 29662679 ~ 29670116 (+)
G15457 NA non-coding upstream 9731 29199721 ~ 29201766 (+)
G15450 NA non-coding upstream 31699 29144682 ~ 29179798 (+)
G15425 NA non-coding upstream 145090 29066117 ~ 29066407 (+)
G15424 NA non-coding upstream 153330 29057686 ~ 29058167 (+)
G15422 thrab,LOC108430158,LOC106579329,LOC107665883 non-coding upstream 167524 29043717 ~ 29043973 (+)
G15461 NA non-coding downstream 1512 29213230 ~ 29213607 (+)
G15475 NA non-coding downstream 22032 29233750 ~ 29313708 (+)
G15505 rara,LOC106578316,LOC108434941,LOC107571738 non-coding downstream 214182 29425900 ~ 29426617 (+)
G15591 NA non-coding downstream 679198 29890916 ~ 29893494 (+)
G15605 NA non-coding downstream 718946 29930664 ~ 30019687 (+)
AMCG00016731 NA other upstream 450305 28743360 ~ 28761192 (+)
G15223 NA other upstream 1105786 28104737 ~ 28105711 (+)
AMCG00016707 col1a1,LOC100135784,LOC100286406,LOC106600852,LOC105005744 other upstream 1212720 27964578 ~ 27998777 (+)
AMCG00016702 NA other upstream 1332800 27872663 ~ 27878697 (+)
AMCG00016706 LOC102299446 other upstream 1372394 27836513 ~ 27839103 (+)
AMCG00016739 wnt3,LOC103381861,LOC108249203,LOC104961604,LOC104925160,LOC105936264,LOC101174231,LOC100707095,LOC108273758,LOC106589299,LOC101469754 other downstream 22786 29234504 ~ 29256824 (+)
AMCG00016769 NA other downstream 810889 30022607 ~ 30107727 (+)
AMCG00016772 g6pc other downstream 861220 30072938 ~ 30083528 (+)
AMCG00016770 rpl27,LOC106601555,LOC107551168 other downstream 897881 30109599 ~ 30113284 (+)
G15659 NA other downstream 1024736 30236454 ~ 30236841 (+)

Expression


Co-expression Network