G15585


Basic Information

Item Value
gene id G15585
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 29802895 ~ 29807133 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU19365
CTTTCTGTCAGATATTGAACTATTCGTCACTTCTCGCGTTGTCGCAGGTGGAGTTGATCATCTCGTAGGTCTGAGCTTCACAAAAACCCAGTACTGCGGAGGTCATTCATATTGTCAATGTAtgaatgtgttgtgttgtaatgaAATAAGGACTCGGTGTGTATATCTGAACTTAGCGAAACACTCCAGCAATAATATCCGTAAGAAAGGAGGAGATTGGGTTTCAGTTTAACGACGGGAAAATGTCAATGGATAAGAATGTGGAGAGAGGATCCTGGCAACTGCTTTTACCGGCGGTCTGGCGCTCAGTCTGCTCGCGTAAAGatGTGTTATTGCAGAAGCAGTAACACAGGTCGAGCCAAACAGATGAATGGACCCACAGCCATGGCTTGAGATGAATCCCCAGCCCAACTGTCTCCTCCCCAAGaacCAAGCAGTCCTCAAAAAGGAATCTCAATGACAAATGAAATCCAATCCACTTGGTTTTAAAAGCGCATCTTTGCTGAACCACATCTACCTTGAAACGCTCTCTCACCAATCTATGTCCCTGCAGCAGGAGTCTGTCGATCTCTTCGGGAGTGTTTCCTTTATCCTGGACTCGTACTCCACCACTGTGATCCCTACAAACTGACTTCACTGGCTCATGCAGCCCTGCATCCTCTCTCTAACTCCGGTGCTGTTTTCACAGTTCTGCAGCATTCCTGGCAAGTGATCCCCCCCTCTCTTTTAAGCGCTGAGGTGGGAAAGACTGGCAAGTTTATGGAGTGTAATGCGAGCTAGTGGAGGAGGAGCCCTGCAGGCCACATGTTGGTACCCTCCAACCAACTCTGCCTCATCAACTATTAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19365 True 848 lncRNA 0.48 3 29802895 29807133

Neighbor

gene id symbol gene type direction distance location
AMCG00016758 med24 coding downstream 88430 29701416 ~ 29714465 (-)
AMCG00016751 NA coding downstream 152037 29632278 ~ 29650858 (-)
AMCG00016752 NA coding downstream 175463 29626884 ~ 29627432 (-)
AMCG00016750 NA coding downstream 288903 29510696 ~ 29513992 (-)
AMCG00016749 rara,LOC100136372,LOC106578316 coding downstream 357327 29424596 ~ 29445568 (-)
AMCG00016762 dhx8,LOC107706906 coding upstream 86080 29893213 ~ 29904656 (-)
AMCG00016766 arl4d,LOC107552768,LOC106579387,LOC107706901 coding upstream 186397 29993530 ~ 29996857 (-)
AMCG00016767 NA coding upstream 201004 30008137 ~ 30013935 (-)
AMCG00016768 NA coding upstream 212382 30019515 ~ 30036042 (-)
AMCG00016765 NA coding upstream 260188 30067321 ~ 30071224 (-)
G15525 NA non-coding downstream 538228 29261312 ~ 29264667 (-)
G15448 NA non-coding downstream 736507 29066111 ~ 29066388 (-)
G15365 fam171a2,LOC106600878,LOC106607454 non-coding downstream 1106975 28695698 ~ 28695920 (-)
G15364 NA non-coding downstream 1120557 28681838 ~ 28682338 (-)
G15330 NA non-coding downstream 1351263 28451398 ~ 28451632 (-)
G15673 psme3,LOC106589310,LOC107706898,LOC107669474 non-coding upstream 231657 30038790 ~ 30041875 (-)
G15675 NA non-coding upstream 235442 30042575 ~ 30044565 (-)
G15690 NA non-coding upstream 302320 30109453 ~ 30113284 (-)
G15708 NA non-coding upstream 397689 30204822 ~ 30205115 (-)
G15711 NA non-coding upstream 400554 30207687 ~ 30208537 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other downstream 577308 29201872 ~ 29225587 (-)
AMCG00016732 NA other downstream 1017388 28781472 ~ 28785507 (-)
AMCG00016712 NA other downstream 1645695 28130012 ~ 28157200 (-)
G15076 NA other downstream 2374244 27424893 ~ 27428651 (-)
G15067 NA other downstream 2398973 27401676 ~ 27403922 (-)
G15706 NA other upstream 394326 30201459 ~ 30202351 (-)
G15787 NA other upstream 719159 30526292 ~ 30529500 (-)
AMCG00016815 NA other upstream 1573414 31380547 ~ 31388268 (-)
AMCG00016847 NA other upstream 2454416 32261549 ~ 32267968 (-)
G16247 NA other upstream 2615925 32423058 ~ 32423438 (-)

Expression


Co-expression Network