G15845


Basic Information

Item Value
gene id G15845
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 30998634 ~ 31002128 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU19678
GGGGCCTTGTATGTGCTTATCTAGGGCtgtgttaatgtaatattttcagtCAGACTTCTTCACCACTTACTTTACAATTCTGGGAAATTTCCATTATCTCAATCCATTTATATGTGTGCTTCATAGtggcattttattaattggaaCTAACAGCTGTTTTTATTCCCAGCTTAGTTCCAGTTataattttataaacaaaactgGGGCTTTTGTATGGAAATGGCGAATGAGTAGCTGAACAGCAGCATGCATGTAGCCACTTGTGTCCAAAACAAAATGGTCAGCCAGCCAACATTGCCTGTTGTaagccattttattttacaaatgtaccaAAACTAATCCCATgtttcaatatatacattttcataaaaaagaaatatataagctttaatgaaatacaaaacatgcaaaattCAAAAAAATTCCATGCTGTATTTTAAAGGATATTGCTTGTCAGAACCATGTCTCTACCACAAAAATACCCACATTATACCAAGGCCGGCCAAAAGTACTAGATACATTACTgtgttaaaaacacacaaaatcaagTGTTCTGACAATTGTAAAGAATCTAGAAATGACCTTTCACAAGGCCTAAGCTGGACCAGGTTATTTTGCCGTTCTAGTagttgcatttttgtttatttttttggcgATAGTTCTAGTCTGTCCAGATACCCCCTGatgtttttcatggtttaaaccaacaatgtacaaaaaatacactgaaacctCCACAGATTCTCAAAATTATAGTTTTCACCCAGATGCAATCAGtacatgtaaacaaaaaagagaatTGCATATGCTTTACTTTAAAAgtataaagaattaaaaatcCAAAAAAGAAATAGGCtataacacaatttatttttgtcttgctttGCTCATTACTCCATAACACACTACCCTCAAAAGGCAACTGCAACTTAAATTtgatcaataatacaaaatgatgggaatgaaaaacaataaatgcagaGGATGCTTCCTGTATATTTTCAACAATTCGTACCAGAACCAAATTACTTACCTGATagatattatatacagtacatcatTACTGTAACtgaatttatacatttgtttcaatTGCAGCAAATGTATTAACTGACCAATGCATTATTGTCAGGCTATGGGCTTCAGTAGGGAAATGGTTCTTTCAGTGCAGGCAATCTCACATTGAGGATTACTCAGAAAGCATAATACATAACCTTAGAGAGCAGAAAACAAGTCCATCAACTTGTTCATCATaagtataaaacaaattctAAATACCAACAAGAAGCAAAAAATGCTTGAATGCCATCtttgaaatacaacaaacaGTAAAGCCTAGAGCAACTCTGACAAATGGGAACATCCAAGTGCTCTTGTTTTTGGaacactatatataaaaaaatactttataaactCAGCCTCCTCACATGAAGcctttaacatttatttaagtgaTGTAAAAATGTGGCACCATCAAAAGCAGATGCCATCTAAGGAAAGGATTGTGTGCTGTTtaaagcatttgaaataaaaaaaactcatagCAAATGTGTTAGTCATTAATGGCAGAAATGTTAATTGTCATTAGATATCCAGGAATTGCTTTGGTATATGTATAGTACCTCACTACCTTGAACTGAAATATGGGCAAGATTTTCCTTTTCACAAGGGTATATTTAAAGACgtatacatttaattagtatttttaaatattgttttgtataccCAATGCcaaatcagtttaattataGATGTACCCTTGGTAATATTTGAAGGCATCTGGCATATTTCAGATTCGCAAAGCACTGCTGCAGATCATATTGATTGATGTAACTGATCAAGTAACTTGTGTCCTTGCAGACACATACAAGCAGTGTAGAAGAAAATACTCCAATCCAATGTTGGGTTTAAGTGCATAACAATGCTGGTTGGTCGTAGAAATGGTAACAAGGCTTGGCAGTGCTTTCATTTTAAGTAGCATATGGTGATCTCTCCGAGCTGGAATGTTATTTTTGTCAACCATATGATTCTGCAGGGGTACAGTTTCCTCAACATTACCATCCTAACCTGAAAAGACTACATTGAGGTCAAAGGTCTACAAACATGATGTGCAAGTTCTCCATGGCTCCTGTGCATAGTGGAATAAAAATGGCTTAGATTCCCAATTAGTCCTGCCATGTTTCTTAATTACAatcacccAGCATCACAAAGTCCCGCCATACTCATATTAGAGCAGTTATAGCAAGGTAAACATCACCTGGAATTATATAAATGCAagctagaaaaacaaaaaaataaaaacaaaagtggttcttaattaacattttgttcaCATCTTATCCCTAAAGCAAACTGTCAAGCCTGGTCTCCTCCCCAAACCCTTCAATGAAACTCTGAGATGCCATTTTTGGGATAAGAGCTTACAGCCCCACTGACAGGCAAGATAAAGGCCTGCCTGAATTCCCCCttcaagtacatttaaaacatgtaaaatgtaaagacCATTCAGTATCACTTTAAACCTATACAAACCCGTTCTAATTGAATGATGCGATTCCCCAATTTCTTCAAAATTGTCATTTTCAGCACCAATCACTGGTTACAGGATCACAAGTCTCTTCCCAAGCTGAAATTGTGTTTTACTCTGCCTTTTCAGTAGGCTAAACAAGTAATCCAGGTTTATATAGGCTGAGCATGTGATTTgcgcacatttttttttatttttaactgtataCGTGTCTGTGGAATGTAGTTATAAGGTTCAGATTGGGAGAAGactttgcaaatgaaaaaattGGATAATTTTCAAATAACTTCCTTTGATTTGAGTGATACGGGGAGAATCTCTTTATAGATACCCTTGCCTCTCCAATCAATAGTTTACTAGCCACTACGGTTGTGGGGGGTGGATATGCCTCAATCTACACAGGGCCTTCCCTGAGTTTCCagtgctatcctatcaataaaaaaaatatatatatatattatataaattgtattagcTGATGTTCCTTCCAGTTCGGTACTTAAGTCACTAAGATTTCGGCTTTGAACAGCATGACCCAAATTGAATTAAACTCCTTAAGGAAAGTCATTGCTGTACCATCGAGAACAATATTGCAAAGACAACAGGTTGCCAAGAGCTAGAGAACGTCACAAATAAGGCACAGCTTTAAAAAATTTACCATAAAGTCACAGTCAATTCACAGTTTCCCCATGGCTGTCCAATGCTTATAGCATCAAGTTACGGTGATTTGCCATAGTTTCGCCATGCTTTACCACAGAATTATTTGATTTTCCATTCTTGTACCATGGTTGTAATGTGCTTTACTTATACACTGCTGTGCTTTTACCATAGTATACCACAGTAACATTTTGTAAGCATGGTACAGGCGGCAGAGACTGGCTTTAAGTGAGACGAATTCCAAGGACTTGCTCCAGTTCTTGTCTGCGTTGCTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19678 True 3461 lncRNA 0.37 2 30998634 31002128

Neighbor

gene id symbol gene type direction distance location
AMCG00016793 NA coding downstream 435040 30558256 ~ 30563594 (-)
AMCG00016792 NA coding downstream 440842 30551128 ~ 30557792 (-)
AMCG00016794 NA coding downstream 530830 30465157 ~ 30467804 (-)
AMCG00016780 NA coding downstream 757065 30236974 ~ 30241569 (-)
AMCG00016779 gosr2,LOC107654523,LOC107721531,LOC107674598 coding downstream 775225 30216244 ~ 30223409 (-)
AMCG00016801 psmc5,LOC107753303,LOC107745657,LOC106579096 coding upstream 978 31003106 ~ 31008426 (-)
AMCG00016800 NA coding upstream 10435 31012563 ~ 31015970 (-)
AMCG00016802 LOC105013322 coding upstream 58223 31060351 ~ 31060686 (-)
AMCG00016807 becn1,LOC102786760 coding upstream 175428 31177556 ~ 31183301 (-)
AMCG00016812 NA coding upstream 290154 31292282 ~ 31315388 (-)
G15746 NA non-coding downstream 566636 30429929 ~ 30431998 (-)
G15716 NA non-coding downstream 761767 30233548 ~ 30236867 (-)
G15711 NA non-coding downstream 790097 30207687 ~ 30208537 (-)
G15708 NA non-coding downstream 793519 30204822 ~ 30205115 (-)
G15690 NA non-coding downstream 885350 30109453 ~ 30113284 (-)
G15854 NA non-coding upstream 30942 31033070 ~ 31033320 (-)
G15864 NA non-coding upstream 101251 31103379 ~ 31106792 (-)
G15890 NA non-coding upstream 170057 31172185 ~ 31176602 (-)
G15927 NA non-coding upstream 367952 31370080 ~ 31379449 (-)
G15947 phb,LOC107661032 non-coding upstream 418616 31420744 ~ 31421968 (-)
G15787 NA other downstream 469134 30526292 ~ 30529500 (-)
G15706 NA other downstream 796283 30201459 ~ 30202351 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other downstream 1773047 29201872 ~ 29225587 (-)
AMCG00016732 NA other downstream 2213127 28781472 ~ 28785507 (-)
AMCG00016712 NA other downstream 2841434 28130012 ~ 28157200 (-)
AMCG00016815 NA other upstream 378419 31380547 ~ 31388268 (-)
AMCG00016847 NA other upstream 1259421 32261549 ~ 32267968 (-)
G16247 NA other upstream 1420930 32423058 ~ 32423438 (-)
AMCG00016859 NA other upstream 1495379 32497507 ~ 32507319 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 2173948 33176076 ~ 33178883 (-)

Expression


Co-expression Network