G15853


Basic Information

Item Value
gene id G15853
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 31033069 ~ 31033321 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU19686
aaatgaaaaccatattcttggagatagtcaacatgggtttagacgaggcagatcatgtcttactaatttattagaattttttgaacatgcaactgcagctgtagatcacgtgaaagcatatgatatgatatacttagatttccaaaaagcttttgataaggttccacaccaaagactgatcctcaaattggaagctgtaggcattcagggtaatgtaagtagatggattatgaactggttgatgtataggaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19686 True 253 lncRNA 0.36 1 31033069 31033321

Neighbor

gene id symbol gene type direction distance location
AMCG00016799 smarcd2,LOC107569192,LOC107694073,LOC107684754,LOC107560559,LOC107753305 coding upstream 31248 30984473 ~ 31001821 (+)
AMCG00016797 asic2,LOC106600659,LOC108411330 coding upstream 83195 30924013 ~ 30949874 (+)
AMCG00016798 NA coding upstream 194715 30837725 ~ 30838354 (+)
AMCG00016796 NA coding upstream 455472 30576421 ~ 30577597 (+)
AMCG00016795 NA coding upstream 463247 30564566 ~ 30569822 (+)
AMCG00016805 NA coding downstream 39673 31072994 ~ 31103613 (+)
AMCG00016803 NA coding downstream 74108 31107429 ~ 31111908 (+)
AMCG00016804 NA coding downstream 80406 31113727 ~ 31129595 (+)
AMCG00016806 NA coding downstream 109087 31142408 ~ 31176537 (+)
AMCG00016808 NA coding downstream 150369 31183690 ~ 31230795 (+)
G15847 psmc5,LOC107745657,LOC107684752 non-coding upstream 26063 31005897 ~ 31007006 (+)
G15817 NA non-coding upstream 126230 30905610 ~ 30906839 (+)
G15730 NA non-coding upstream 601275 30429053 ~ 30431794 (+)
G15651 NA non-coding upstream 817359 30213172 ~ 30215710 (+)
G15605 NA non-coding upstream 1013382 29930664 ~ 30019687 (+)
G15961 NA non-coding downstream 441986 31475307 ~ 31476218 (+)
G15966 NA non-coding downstream 470758 31504079 ~ 31504552 (+)
G15995 NA non-coding downstream 581899 31615220 ~ 31644515 (+)
G16037 NA non-coding downstream 721721 31755042 ~ 31755427 (+)
G16169 NA non-coding downstream 1228390 32261711 ~ 32262672 (+)
G15659 NA other upstream 796228 30236454 ~ 30236841 (+)
AMCG00016770 rpl27,LOC106601555,LOC107551168 other upstream 919785 30109599 ~ 30113284 (+)
AMCG00016769 NA other upstream 925342 30022607 ~ 30107727 (+)
AMCG00016772 g6pc other upstream 949541 30072938 ~ 30083528 (+)
AMCG00016739 wnt3,LOC103381861,LOC108249203,LOC104961604,LOC104925160,LOC105936264,LOC101174231,LOC100707095,LOC108273758,LOC106589299,LOC101469754 other upstream 1776245 29234504 ~ 29256824 (+)
G15855 LOC105013322 other downstream 26019 31059340 ~ 31061145 (+)
AMCG00016820 NA other downstream 440385 31473706 ~ 31493104 (+)
AMCG00016829 NA other downstream 668348 31701669 ~ 31731446 (+)
AMCG00016830 NA other downstream 695235 31728556 ~ 31751113 (+)
AMCG00016841 NA other downstream 1218487 32251808 ~ 32260627 (+)

Expression


Co-expression Network