G15966


Basic Information

Item Value
gene id G15966
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 31504079 ~ 31504552 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU19822
ATATGTCAATTTTGGAATTAACATATAATGAAAACCATTTCATTTAAGAGGAACCAAAGGCATTTGTCTtgctattaaacatttgttaaagATTTTTCACAGGAGGGGGAAATTCGTAAACTAAAGTctgtaaaatgaatgtgaaGCTGTCTCAATGAGTTTGTCTCTATTCTTGtatgtttcctttgttttttattttattttttgaatccTTGGGTCTGtgaattttagaaaaaaaaatgtttgtacaaTTGTTATGGCAATAATCTGTCACTGTTGGGCTGATTTCCTGTATGTGTATTCCTCTTCCCTGACAGTGTGTCTATGGCATGCTCCTTAGACTCCTATCTGTTCATCCAGAGTTTTTATCTTGTATGcaagcatttctgtttttaaacaccTGTTCTATATGTATATTGGTCTTCACAGTGAAGGATGTATTTGGAATATAAAGCCatcaataatagaaaacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19822 True 474 lncRNA 0.46 1 31504079 31504552

Neighbor

gene id symbol gene type direction distance location
AMCG00016817 NA coding upstream 1063 31493252 ~ 31503016 (+)
AMCG00016819 znf652,LOC108258819 coding upstream 36620 31447119 ~ 31467459 (+)
AMCG00016813 phb,LOC107661032 coding upstream 83103 31417981 ~ 31420976 (+)
AMCG00016814 NA coding upstream 92026 31393171 ~ 31412053 (+)
AMCG00016809 NA coding upstream 133730 31363835 ~ 31370349 (+)
AMCG00016818 eftud2,LOC102798265 coding downstream 2999 31507551 ~ 31523662 (+)
AMCG00016826 NA coding downstream 62350 31566902 ~ 31569427 (+)
AMCG00016822 NA coding downstream 75590 31580142 ~ 31591537 (+)
AMCG00016821 NA coding downstream 107065 31611617 ~ 31634762 (+)
AMCG00016825 NA coding downstream 130507 31635059 ~ 31637045 (+)
G15961 NA non-coding upstream 27861 31475307 ~ 31476218 (+)
G15853 NA non-coding upstream 470758 31033069 ~ 31033321 (+)
G15847 psmc5,LOC107745657,LOC107684752 non-coding upstream 497073 31005897 ~ 31007006 (+)
G15817 NA non-coding upstream 597240 30905610 ~ 30906839 (+)
G15730 NA non-coding upstream 1072285 30429053 ~ 30431794 (+)
G15995 NA non-coding downstream 110668 31615220 ~ 31644515 (+)
G16037 NA non-coding downstream 250490 31755042 ~ 31755427 (+)
G16169 NA non-coding downstream 757159 32261711 ~ 32262672 (+)
G16211 NA non-coding downstream 933702 32438254 ~ 32442585 (+)
G16290 NA non-coding downstream 1352999 32857551 ~ 32859016 (+)
AMCG00016820 NA other upstream 10975 31473706 ~ 31493104 (+)
G15855 LOC105013322 other upstream 442934 31059340 ~ 31061145 (+)
G15659 NA other upstream 1267238 30236454 ~ 30236841 (+)
AMCG00016770 rpl27,LOC106601555,LOC107551168 other upstream 1390795 30109599 ~ 30113284 (+)
AMCG00016769 NA other upstream 1396352 30022607 ~ 30107727 (+)
AMCG00016829 NA other downstream 197117 31701669 ~ 31731446 (+)
AMCG00016830 NA other downstream 224004 31728556 ~ 31751113 (+)
AMCG00016841 NA other downstream 747256 32251808 ~ 32260627 (+)
AMCG00016854 NA other downstream 994504 32499056 ~ 32503372 (+)
G16289 NA other downstream 1351809 32856361 ~ 32857440 (+)

Expression


Co-expression Network