Gene
RNA
| Item | Value |
|---|---|
| gene id | G15982 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 31504079 ~ 31504548 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU19848 | True | 470 | lncRNA | 0.32 | 1 | 31504079 | 31504548 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016816 | NA | coding | downstream | 100135 | 31400817 ~ 31403944 (-) |
| AMCG00016811 | NA | coding | downstream | 166799 | 31336445 ~ 31337280 (-) |
| AMCG00016812 | NA | coding | downstream | 188691 | 31292282 ~ 31315388 (-) |
| AMCG00016807 | becn1,LOC102786760 | coding | downstream | 320778 | 31177556 ~ 31183301 (-) |
| AMCG00016802 | LOC105013322 | coding | downstream | 443393 | 31060351 ~ 31060686 (-) |
| AMCG00016823 | nmt1,LOC102778525 | coding | upstream | 139308 | 31643856 ~ 31653933 (-) |
| AMCG00016824 | NA | coding | upstream | 153700 | 31658248 ~ 31674496 (-) |
| AMCG00016831 | NA | coding | upstream | 250987 | 31755535 ~ 31762700 (-) |
| AMCG00016833 | NA | coding | upstream | 272864 | 31777412 ~ 31801252 (-) |
| AMCG00016835 | NA | coding | upstream | 298489 | 31803037 ~ 31818127 (-) |
| G15976 | NA | non-coding | downstream | 14243 | 31489261 ~ 31489836 (-) |
| G15962 | NA | non-coding | downstream | 22678 | 31476843 ~ 31481401 (-) |
| G15947 | phb,LOC107661032 | non-coding | downstream | 82111 | 31420744 ~ 31421968 (-) |
| G15927 | NA | non-coding | downstream | 124630 | 31370080 ~ 31379449 (-) |
| G15890 | NA | non-coding | downstream | 327477 | 31172185 ~ 31176602 (-) |
| G15985 | NA | non-coding | upstream | 23502 | 31528050 ~ 31528621 (-) |
| G16004 | NA | non-coding | upstream | 100058 | 31604606 ~ 31615213 (-) |
| G16024 | NA | non-coding | upstream | 189268 | 31693816 ~ 31697608 (-) |
| G16026 | NA | non-coding | upstream | 194588 | 31699136 ~ 31699400 (-) |
| G16043 | NA | non-coding | upstream | 214352 | 31718900 ~ 31720036 (-) |
| AMCG00016815 | NA | other | downstream | 115811 | 31380547 ~ 31388268 (-) |
| G15787 | NA | other | downstream | 974579 | 30526292 ~ 30529500 (-) |
| G15706 | NA | other | downstream | 1301728 | 30201459 ~ 30202351 (-) |
| AMCG00016740 | ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 | other | downstream | 2278492 | 29201872 ~ 29225587 (-) |
| AMCG00016732 | NA | other | downstream | 2718572 | 28781472 ~ 28785507 (-) |
| AMCG00016847 | NA | other | upstream | 757001 | 32261549 ~ 32267968 (-) |
| G16247 | NA | other | upstream | 918510 | 32423058 ~ 32423438 (-) |
| AMCG00016859 | NA | other | upstream | 992959 | 32497507 ~ 32507319 (-) |
| G16356 | fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 | other | upstream | 1671528 | 33176076 ~ 33178883 (-) |
| AMCG00016889 | LOC107570748,LOC106906011 | other | upstream | 1887241 | 33391789 ~ 33434651 (-) |
