G15995


Basic Information

Item Value
gene id G15995
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 31615220 ~ 31644515 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU19869
ccccccccccccccccccccccccccccccccccccccccgagagcactTCTGGTTCAAAGCCTCCTAGAAAAACAGCAGCCCTTGTCTAGCGTCCACTTTGGATTtggaatatttaatatattttattttgatgagaatttatttttgcaccctctttttgttggtttgcttgCTTTCCTTCTAAAACACTGCTGGATTCTGCTTttcatggatttattttattgatttattttcgaATGAGAAGGATGCTCAGACGAGCACCCTGTATGTTAAACAGTAAGTGTGTGGTCTGATACAATCAAGACAAAGAGTctgtcatttttgttgttgttgttgtttcgaTTCGTTTGGTTTTGGTCGTTTGCTGTCGGAGCAGTTTGTGAAATGGAGTCCCGTCGGCTGCAACTCCAGCGCGGGGTTTTGGCGCAGAGCCCACGTGGCGATGCAAGTCAAAAGGTCAAAAACATATGGGTTCTCTTTCCTGAAGCGGCaagtctgtccgtctgtccgttCGTCCGTCGGTCAGCGAGTGGCATAGTTTCTTTGCCTGGTCCTGGCGTCGGATCACTGCAGCACCAGGCCAACCTTTCTGAGCCCATGCTGGGACACTTCCAATTGTACAGGTAATACTGCAGGTTGCCGTCTCCGATCCCAAACTTGAGCTTCTCCAGGAAGGTCTTGTTCTCCATCAGGTCCAGTGCATTGAAGACATCAAACCCTTTCTGAGGCGGGGAGATCAAGAGAGTGAGAGAACTGTCCTCATTCAGGCCGGACCCACTTAAGCACCACCAACTGGAGATTTGGACTCGGATGTAAACGCAGGAGGGCTAGGCTGCTAATTGAGCACTGAGGCGGATGTAATATATGACATGAGGGGTGACTGCTCGGACACCTTTCCTGAAACCAAACTGCTGAAATACTGTGTggtgtggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19869 True 936 lncRNA 0.43 3 31615220 31644515

Neighbor

gene id symbol gene type direction distance location
AMCG00016822 NA coding upstream 23683 31580142 ~ 31591537 (+)
AMCG00016826 NA coding upstream 45793 31566902 ~ 31569427 (+)
AMCG00016818 eftud2,LOC102798265 coding upstream 91558 31507551 ~ 31523662 (+)
AMCG00016817 NA coding upstream 112204 31493252 ~ 31503016 (+)
AMCG00016819 znf652,LOC108258819 coding upstream 147761 31447119 ~ 31467459 (+)
AMCG00016828 NA coding downstream 42487 31687002 ~ 31694751 (+)
AMCG00016832 NA coding downstream 55957 31700472 ~ 31701626 (+)
AMCG00016827 tmem98 coding downstream 126411 31770926 ~ 31777458 (+)
AMCG00016836 NA coding downstream 380657 32025172 ~ 32034991 (+)
AMCG00016845 NA coding downstream 430236 32074751 ~ 32084572 (+)
G15966 NA non-coding upstream 110668 31504079 ~ 31504552 (+)
G15961 NA non-coding upstream 139002 31475307 ~ 31476218 (+)
G15853 NA non-coding upstream 581899 31033069 ~ 31033321 (+)
G15847 psmc5,LOC107745657,LOC107684752 non-coding upstream 608214 31005897 ~ 31007006 (+)
G15817 NA non-coding upstream 708381 30905610 ~ 30906839 (+)
G16037 NA non-coding downstream 110527 31755042 ~ 31755427 (+)
G16169 NA non-coding downstream 617196 32261711 ~ 32262672 (+)
G16211 NA non-coding downstream 793739 32438254 ~ 32442585 (+)
G16290 NA non-coding downstream 1213036 32857551 ~ 32859016 (+)
G16323 NA non-coding downstream 1337264 32981779 ~ 32982330 (+)
AMCG00016820 NA other upstream 122116 31473706 ~ 31493104 (+)
G15855 LOC105013322 other upstream 554075 31059340 ~ 31061145 (+)
G15659 NA other upstream 1378379 30236454 ~ 30236841 (+)
AMCG00016770 rpl27,LOC106601555,LOC107551168 other upstream 1501936 30109599 ~ 30113284 (+)
AMCG00016772 g6pc other upstream 1531692 30072938 ~ 30083528 (+)
AMCG00016829 NA other downstream 57154 31701669 ~ 31731446 (+)
AMCG00016830 NA other downstream 84041 31728556 ~ 31751113 (+)
AMCG00016841 NA other downstream 607293 32251808 ~ 32260627 (+)
AMCG00016854 NA other downstream 854541 32499056 ~ 32503372 (+)
G16289 NA other downstream 1211846 32856361 ~ 32857440 (+)

Expression


Co-expression Network