G16154


Basic Information

Item Value
gene id G16154
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32205723 ~ 32206877 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20077
TAAACCCAAGACACGTATAcaacattcatacatttattaaaaaagtattttttaaatgccgtcaagtcattttaaaatcctttttccATTGACCTTAATTAAGTCCAAAATGCCACATAAGGTCAGTCTTCCAGATACTGAGGTGTTTGTGCCTATGCATTTTCGTGCtgccacacattttctttcagtacGCTGGCTTCAATCTAGCATGGCTGTGTGCGCGCATCAACTAGGGGATGACATATCAGGAAAGATATAaccttttcatttaaatcacaTGAATAGAAACTAATGAGGTACTTCCATTAAAGGGCACCTGGATTGATGAAACACATATCATCTACATGCCCAGAGTACCTGTACATCGTGATATACTACACAATTATGCATCAATGGCACTGCGGGGATCTCCAGTGAAAGCCCATTTGTACAGAACCAGCAGTACTACACTGCCATATCTCATCTGCCTAAGAGCCTCTTGAGTGTACAATGAAAAGGTAGGTTTTTGTGAGCACTGTCGAGTTAAAATGTTCCACCAGTTCGAAGAAAAGTGCCGAAAGGAACTGAatcacaaatcaattaaaataaaaaactgatttaaaaaaagacatgcacTGTATATCCACTATTATCATTACCAATAGATTCCTGAAAAGAAACGTGCCCATAAAATGGCATAAAGGGTTTGCCTGCTTTTCTCCATTCCTTTGCCTCAAGAGGTCCATTCCACACAGAATGGATTGTGAGCTTCACTGGTTCTTTTCCTTCCCAATTCGGACTCGAGAAGTGACCAGCTGCTACACTTCACACTAGACTCTATTAGTGTGCCCAAATTGTGCCCAGTCAGGCCACCGAATCCTGTCATGCTCGGGGAGTCCACACCACAAACGGCAGGGCTATAGCAGCACAGGAAGGACTGATGCAGCTCTCACCAATTACACTGCCGAGCTCACTCATGATCCGCACTGCTCACTTGTAAACCAAAAGATGGATCaacctgcccccccaccactcCAGAGAGTATATTTCACAGAACTATGGAAGTAAACACACGCATGCAGTAAGAGATACAACATCAACAGGCCCAACACAGGCACTGTTATTTTGATAGTAATCTATAGCAAGCCTGCAGCCCCATCTAGTGCAGGTATATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20077 True 1155 lncRNA 0.42 1 32205723 32206877

Neighbor

gene id symbol gene type direction distance location
AMCG00016837 LOC106607518,LOC104946854,LOC106600796,LOC102209712,LOC101480582 coding downstream 203188 31979211 ~ 32002535 (-)
AMCG00016838 NA coding downstream 353604 31844462 ~ 31852119 (-)
AMCG00016834 NA coding downstream 361671 31839831 ~ 31844052 (-)
AMCG00016835 NA coding downstream 387596 31803037 ~ 31818127 (-)
AMCG00016833 NA coding downstream 404471 31777412 ~ 31801252 (-)
AMCG00016846 NA coding upstream 63086 32269963 ~ 32284040 (-)
AMCG00016849 NA coding upstream 97773 32304650 ~ 32325161 (-)
AMCG00016850 NA coding upstream 175806 32382683 ~ 32383195 (-)
AMCG00016856 NA coding upstream 231359 32438236 ~ 32469626 (-)
AMCG00016860 NA coding upstream 263018 32469895 ~ 32470107 (-)
G16069 NA non-coding downstream 434449 31769730 ~ 31771274 (-)
G16043 NA non-coding downstream 485687 31718900 ~ 31720036 (-)
G16026 NA non-coding downstream 506323 31699136 ~ 31699400 (-)
G16024 NA non-coding downstream 508115 31693816 ~ 31697608 (-)
G16004 NA non-coding downstream 590510 31604606 ~ 31615213 (-)
G16153 NA non-coding upstream 85 32206962 ~ 32208117 (-)
G16244 NA non-coding upstream 186265 32393142 ~ 32393380 (-)
G16245 NA non-coding upstream 209314 32416191 ~ 32416444 (-)
G16248 NA non-coding upstream 218839 32425716 ~ 32425956 (-)
G16249 NA non-coding upstream 220975 32427852 ~ 32428080 (-)
AMCG00016815 NA other downstream 817455 31380547 ~ 31388268 (-)
G15787 NA other downstream 1676223 30526292 ~ 30529500 (-)
G15706 NA other downstream 2003372 30201459 ~ 30202351 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other downstream 2980136 29201872 ~ 29225587 (-)
AMCG00016732 NA other downstream 3420216 28781472 ~ 28785507 (-)
AMCG00016847 NA other upstream 54672 32261549 ~ 32267968 (-)
G16247 NA other upstream 216181 32423058 ~ 32423438 (-)
AMCG00016859 NA other upstream 290630 32497507 ~ 32507319 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 969199 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 1184912 33391789 ~ 33434651 (-)

Expression


Co-expression Network