G16244


Basic Information

Item Value
gene id G16244
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32393142 ~ 32393380 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20181
TGCCAAGCAATGCTGAAAACCTAGTAAAATGAATAGGCTGGAGCTCAGGATTTTGTAATGCATCCTTTAAGGGAAGGTTGGCGTTCTTCTGGGGTTTTTAAGCTGTCAACAAATTCTCTGCAACTATTTTCTAATTTCCTTCGACCACGACAGcatccttttttccccccttttcccCCAACTTTAACACGCTCTGCTACAACTCTGCTTCCCAATCTTCCCAATCACACGACTGTCCC

Function

GO:

id name namespace
GO:0030001 metal ion transport biological_process
GO:0006811 ion transport biological_process
GO:0006812 cation transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20181 True 239 lncRNA 0.44 1 32393142 32393380

Neighbor

gene id symbol gene type direction distance location
AMCG00016850 NA coding downstream 9947 32382683 ~ 32383195 (-)
AMCG00016849 NA coding downstream 67981 32304650 ~ 32325161 (-)
AMCG00016846 NA coding downstream 109102 32269963 ~ 32284040 (-)
AMCG00016837 LOC106607518,LOC104946854,LOC106600796,LOC102209712,LOC101480582 coding downstream 390607 31979211 ~ 32002535 (-)
AMCG00016838 NA coding downstream 541023 31844462 ~ 31852119 (-)
AMCG00016856 NA coding upstream 44856 32438236 ~ 32469626 (-)
AMCG00016860 NA coding upstream 76515 32469895 ~ 32470107 (-)
AMCG00016858 wnk4b,LOC107754305,LOC107582920,LOC107585056,LOC107740640,LOC107683678,LOC108429078 coding upstream 114969 32508349 ~ 32533759 (-)
AMCG00016857 wnk4,LOC108257086,LOC108429078,LOC105912834 coding upstream 152239 32545619 ~ 32546814 (-)
AMCG00016862 NA coding upstream 190639 32584019 ~ 32590534 (-)
G16153 NA non-coding downstream 185025 32206962 ~ 32208117 (-)
G16154 NA non-coding downstream 186265 32205723 ~ 32206877 (-)
G16069 NA non-coding downstream 621868 31769730 ~ 31771274 (-)
G16043 NA non-coding downstream 673106 31718900 ~ 31720036 (-)
G16026 NA non-coding downstream 693742 31699136 ~ 31699400 (-)
G16245 NA non-coding upstream 22811 32416191 ~ 32416444 (-)
G16248 NA non-coding upstream 32336 32425716 ~ 32425956 (-)
G16249 NA non-coding upstream 34472 32427852 ~ 32428080 (-)
G16250 NA non-coding upstream 40856 32434236 ~ 32436683 (-)
G16292 NA non-coding upstream 461401 32854781 ~ 32857465 (-)
AMCG00016847 NA other downstream 125174 32261549 ~ 32267968 (-)
AMCG00016815 NA other downstream 1004874 31380547 ~ 31388268 (-)
G15787 NA other downstream 1863642 30526292 ~ 30529500 (-)
G15706 NA other downstream 2190791 30201459 ~ 30202351 (-)
AMCG00016740 ormdl3,LOC108273759,LOC107723636,LOC107657273,LOC107556587,LOC102217224,LOC106521946 other downstream 3167555 29201872 ~ 29225587 (-)
G16247 NA other upstream 29678 32423058 ~ 32423438 (-)
AMCG00016859 NA other upstream 104127 32497507 ~ 32507319 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 782696 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 998409 33391789 ~ 33434651 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other upstream 1095345 33488725 ~ 33513579 (-)

Expression


Co-expression Network