G16249


Basic Information

Item Value
gene id G16249
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32427852 ~ 32428080 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20186
GGCCGGTGTACCAGGGGTCCGCCTCCAGGGGGATCATGGGCAGGACAGGGGGGAACACCCCACAGTTGGACTCCACCAGATGTCCCTGCACCGTGATGTTCATGTTGGTGGCATTGGGTCTGAAGTGCATCTTCAGTGGGGCAATGTTACTGAAGCGCACTCCGGACAGGCAGCCGATCAGCCCGGGGGTGTTGTGTCTCTGCACCTCATAGTCGATCTCGCCCACCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20186 True 229 lncRNA 0.61 1 32427852 32428080

Neighbor

gene id symbol gene type direction distance location
AMCG00016850 NA coding downstream 44657 32382683 ~ 32383195 (-)
AMCG00016849 NA coding downstream 102691 32304650 ~ 32325161 (-)
AMCG00016846 NA coding downstream 143812 32269963 ~ 32284040 (-)
AMCG00016837 LOC106607518,LOC104946854,LOC106600796,LOC102209712,LOC101480582 coding downstream 425317 31979211 ~ 32002535 (-)
AMCG00016838 NA coding downstream 575733 31844462 ~ 31852119 (-)
AMCG00016856 NA coding upstream 10156 32438236 ~ 32469626 (-)
AMCG00016860 NA coding upstream 41815 32469895 ~ 32470107 (-)
AMCG00016858 wnk4b,LOC107754305,LOC107582920,LOC107585056,LOC107740640,LOC107683678,LOC108429078 coding upstream 80269 32508349 ~ 32533759 (-)
AMCG00016857 wnk4,LOC108257086,LOC108429078,LOC105912834 coding upstream 117539 32545619 ~ 32546814 (-)
AMCG00016862 NA coding upstream 155939 32584019 ~ 32590534 (-)
G16248 NA non-coding downstream 1896 32425716 ~ 32425956 (-)
G16245 NA non-coding downstream 11408 32416191 ~ 32416444 (-)
G16244 NA non-coding downstream 34472 32393142 ~ 32393380 (-)
G16153 NA non-coding downstream 219735 32206962 ~ 32208117 (-)
G16154 NA non-coding downstream 220975 32205723 ~ 32206877 (-)
G16250 NA non-coding upstream 6156 32434236 ~ 32436683 (-)
G16292 NA non-coding upstream 426701 32854781 ~ 32857465 (-)
G16293 NA non-coding upstream 431161 32859241 ~ 32861597 (-)
G16325 NA non-coding upstream 556174 32984254 ~ 32984464 (-)
G16375 NA non-coding upstream 827573 33255653 ~ 33256382 (-)
G16247 NA other downstream 4414 32423058 ~ 32423438 (-)
AMCG00016847 NA other downstream 159884 32261549 ~ 32267968 (-)
AMCG00016815 NA other downstream 1039584 31380547 ~ 31388268 (-)
G15787 NA other downstream 1898352 30526292 ~ 30529500 (-)
G15706 NA other downstream 2225501 30201459 ~ 30202351 (-)
AMCG00016859 NA other upstream 69427 32497507 ~ 32507319 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 747996 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 963709 33391789 ~ 33434651 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other upstream 1060645 33488725 ~ 33513579 (-)
G16563 NA other upstream 1678610 34106690 ~ 34107941 (-)

Expression


Co-expression Network