G16289


Basic Information

Item Value
gene id G16289
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32856361 ~ 32857440 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20240
GCAGAGACAGGCTTCAGGTCTCCTGGTTAGTGAGTGGGACTCCTGGGAGGAGAAATGTAGATCTGTCCAGAGCACATGAGTGTTAATGTTCGCTGTGACAATACTTCACAAAACAAGCCCTGGGGGcaaaaacatgaacaacaaCTGGACTTGCACACACTCCTGCAATGTGGGGATGCAGCAGTCGCACTCTGTGTACCCGCAGCCCCGGGGGATGTCTGCAGCCTTCGttcgcccccccacccccctgccctcAAAGTGTCAACTGAACAGAGACCGTAGCTCGTTTTCATTTTTATCGCAGTGCAGTTTTAAGCAAACAAAGCAAAGTTTGTAAAAGCAAGCAAGTTCCGCATGCAGAGACCTTTTAGAATATGTCTACTCAAAAAGAGTTTCTTTTTCAAAGGGGGGGGTGGAGTAACTCAGTTCAGGAGTAAATAAAGAAACCCCATTAATCACTGCAGACTTTAAAATCATCTAACTTAAGGGATGGCTATAATCAAATCTGTTTCTGCAACATCTTCACATGTTAAAGTGAAGCGATTGGGCCAGTGAGTGTCGATATTATGGTCGCTGATCAGTTATTAATCTCTTTCCCCCATTGCGTTCCAGTATTTGGGGAGTCACCCAGTAAAGATGCTATCTGTGTGAAGCCTGGACTCATTTCCTGTCACGCCTGTGGTAAACAGTTGTCCATAGATTTTTCTCTGCTTTCAAGCGTGCTCTTAAAGAGATTGCTGTTCTATACTGTAAGAGATTGCTATGTTCtatactgtaaatgtaacaaaaagaCCGTTTTACTTATGTCAAACTTGTACTTAGAAAAACAActgaatatttataattttaggtatataaatatatatactttttttggtttgttgatTTTTGgttggcttttgtttttgattttttgttttgttttgtttgttttgttcaatacGTCATGGGCAACCTGCTTTGAAAAATCAACAGGGAGAAAAAGGGGGACATTCACAAACTGCATACTtgaattttctttctttttttatctcgtTTTTTTATCTCGTATTGAAGAATTAGTTCTTTTTcataatgatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20240 True 1080 TUCP 0.35 1 32856361 32857440

Neighbor

gene id symbol gene type direction distance location
AMCG00016865 NA coding upstream 60 32810085 ~ 32856301 (+)
AMCG00016863 NA coding upstream 78889 32773075 ~ 32777472 (+)
AMCG00016861 NA coding upstream 248979 32590767 ~ 32607382 (+)
AMCG00016855 NA coding upstream 357853 32497882 ~ 32498508 (+)
AMCG00016853 NA coding upstream 360614 32489913 ~ 32495747 (+)
AMCG00016866 ace,LOC107598651 coding downstream 38319 32895759 ~ 32921227 (+)
AMCG00016872 LOC101070426,LOC103367899,LOC104923905 coding downstream 129140 32986580 ~ 32989958 (+)
AMCG00016873 NA coding downstream 155478 33012918 ~ 33021870 (+)
AMCG00016875 NA coding downstream 177862 33035302 ~ 33109567 (+)
AMCG00016874 NA coding downstream 291051 33148491 ~ 33151617 (+)
G16211 NA non-coding upstream 413776 32438254 ~ 32442585 (+)
G16169 NA non-coding upstream 593689 32261711 ~ 32262672 (+)
G16037 NA non-coding upstream 1100934 31755042 ~ 31755427 (+)
G15995 NA non-coding upstream 1211846 31615220 ~ 31644515 (+)
G15966 NA non-coding upstream 1351809 31504079 ~ 31504552 (+)
G16290 NA non-coding downstream 111 32857551 ~ 32859016 (+)
G16323 NA non-coding downstream 124339 32981779 ~ 32982330 (+)
G16350 NA non-coding downstream 322265 33179705 ~ 33179940 (+)
G16351 NA non-coding downstream 322799 33180239 ~ 33180439 (+)
G16395 NA non-coding downstream 467654 33325094 ~ 33328342 (+)
AMCG00016854 NA other upstream 352989 32499056 ~ 32503372 (+)
AMCG00016841 NA other upstream 595734 32251808 ~ 32260627 (+)
AMCG00016830 NA other upstream 1105248 31728556 ~ 31751113 (+)
AMCG00016829 NA other upstream 1124915 31701669 ~ 31731446 (+)
AMCG00016820 NA other upstream 1363257 31473706 ~ 31493104 (+)
AMCG00016880 dcaf7,LOC100702343,LOC105030232,LOC105898766 other downstream 462704 33320144 ~ 33333746 (+)
AMCG00016898 NA other downstream 772572 33630012 ~ 33650080 (+)
AMCG00016901 NA other downstream 811153 33668593 ~ 33674361 (+)
G16546 NA other downstream 1189931 34047371 ~ 34047720 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other downstream 1235836 34093276 ~ 34099596 (+)

Expression


Co-expression Network