G16290


Basic Information

Item Value
gene id G16290
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32857551 ~ 32859016 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20241
AATTTAGAATTGCATGCATGACAGCCATATTTCAAAGTTACACAATCATGGGAAAACAACCGTAGAAATatagtttattgtatttgtcGCCTGACGGAATTATTAATTCAGTGACAACAATTATGTTTACAAGTCATTAATATGCACCAGgcattttatattcataaatatgtgaatttaaacatttctgacattttcCAGAAGAGAGTTCTCTACAATAGAAATATTCTGATATccaaaatcacatttttgtgGGAGGTGGGGGTTATTGATGACGTGAGATCCGGGGAAAAGAATGTCTAGAAATTCACAGTAGTGTTTTCCCCAAAGTATTTTCACCGTTTATTCCAGGAACGTATTCTAACATTGCACTGCACTTGTGCAGATTTCAGCTCTGCAGAAACATCTCACCTCAACCtatgctctgtttttttttttttaataagtaggAATAAGGAAAGATTGGGGTGAATCAACCTTCGATAGAAAGAAATTAGAGCATGGGAATAACAGATGGAcatacacagagaaagagagagattggaGGAGGGTGTAGGAGAATGCTACAGAACACAttctatactgtatataactGGAAACACTGAAGTATTAAACTGTACAAGGTATTCCTGTAAAGATCTCTCTTGATTTAGACATGAAAGGCCAAGGCATTCACAGAGCAGCCTGTGTCAGTAAGAACCCGTACTGTAGTTATCTGATTCACTGCAGCGTGAGCGGAGGGCTAGACATTACTTCTTGCAatagcctgtttttttttcccttctacTGGTTCCCTATACTTctcaatgttttttgtatttattccaaccttttgtacaatgtatttttggtttttgtatttatttacattctttTTGCCCGCTATAATACTTAATTGTTGTCAGGCTCTCACAAGTACTATAGTTTGCAGATGTCCCCCTCTAGCACTCATGGGAAATAATAGTGTGAAAATCTGAAGTTTTCTTTCGCAGCTAAAGGCATCTCCAGAAGCGcaaacacacgcacgcacacgatTCTCCTGATACAGGACAGCCATTGACTAGTTGTTCCATTAaattttttatgattattattattattaatattaatattgattgtttatttaatcattcaCAAGGTTTCTGCACTAATTGCCTGTGAAGTTCTTCTATAAGGGTGCACTTTACCGTTATTCAATCTTTATATACATaatctttttattataaaatgtattcatatatatatatatatatgtgtgtgtatgtatgtatgtatgtatacattttctgttatttttttatttttgttttttttgggtgtgtgggggggtttgTCTCTGACTGATGATACTGGATAATTATTTGTGAGTAGTTGTCCTTATTAATAGAAAATAGCAAAccgttttttgtctttttcgtggattttttttttccaagcaaataagtaaatgaataataataaataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20241 True 1466 lncRNA 0.65 1 32857551 32859016

Neighbor

gene id symbol gene type direction distance location
AMCG00016865 NA coding upstream 1250 32810085 ~ 32856301 (+)
AMCG00016863 NA coding upstream 80079 32773075 ~ 32777472 (+)
AMCG00016861 NA coding upstream 250169 32590767 ~ 32607382 (+)
AMCG00016855 NA coding upstream 359043 32497882 ~ 32498508 (+)
AMCG00016853 NA coding upstream 361804 32489913 ~ 32495747 (+)
AMCG00016866 ace,LOC107598651 coding downstream 36743 32895759 ~ 32921227 (+)
AMCG00016872 LOC101070426,LOC103367899,LOC104923905 coding downstream 127564 32986580 ~ 32989958 (+)
AMCG00016873 NA coding downstream 153902 33012918 ~ 33021870 (+)
AMCG00016875 NA coding downstream 176286 33035302 ~ 33109567 (+)
AMCG00016874 NA coding downstream 289475 33148491 ~ 33151617 (+)
G16211 NA non-coding upstream 414966 32438254 ~ 32442585 (+)
G16169 NA non-coding upstream 594879 32261711 ~ 32262672 (+)
G16037 NA non-coding upstream 1102124 31755042 ~ 31755427 (+)
G15995 NA non-coding upstream 1213036 31615220 ~ 31644515 (+)
G15966 NA non-coding upstream 1352999 31504079 ~ 31504552 (+)
G16323 NA non-coding downstream 122763 32981779 ~ 32982330 (+)
G16350 NA non-coding downstream 320689 33179705 ~ 33179940 (+)
G16351 NA non-coding downstream 321223 33180239 ~ 33180439 (+)
G16395 NA non-coding downstream 466078 33325094 ~ 33328342 (+)
G16512 NA non-coding downstream 792065 33651081 ~ 33651289 (+)
G16289 NA other upstream 111 32856361 ~ 32857440 (+)
AMCG00016854 NA other upstream 354179 32499056 ~ 32503372 (+)
AMCG00016841 NA other upstream 596924 32251808 ~ 32260627 (+)
AMCG00016830 NA other upstream 1106438 31728556 ~ 31751113 (+)
AMCG00016829 NA other upstream 1126105 31701669 ~ 31731446 (+)
AMCG00016880 dcaf7,LOC100702343,LOC105030232,LOC105898766 other downstream 461128 33320144 ~ 33333746 (+)
AMCG00016898 NA other downstream 770996 33630012 ~ 33650080 (+)
AMCG00016901 NA other downstream 809577 33668593 ~ 33674361 (+)
G16546 NA other downstream 1188355 34047371 ~ 34047720 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other downstream 1234260 34093276 ~ 34099596 (+)

Expression


Co-expression Network