G16350


Basic Information

Item Value
gene id G16350
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 33179705 ~ 33179940 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20320
AGCAGGCTGACCAATACCCACACAGCTGAAAAAACGAAAGacttaaataaactatttgccATCTGTCTTCTCAGTTCTGCAAAAGGCGTTGACGCGTGAGTTCGCCACGGATATGGACACGGGGCCCTCGTTGAGAAGTGACTTCTCAATATCCATATTCACAGCGCAGTGAAAAGACTACTATATAAACATTCAACAATTGACAAAGACTGCGAATTGTTCCAGTTAAAATGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20320 True 236 lncRNA 0.42 1 33179705 33179940

Neighbor

gene id symbol gene type direction distance location
AMCG00016885 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 coding upstream 1773 33176271 ~ 33177932 (+)
AMCG00016874 NA coding upstream 28088 33148491 ~ 33151617 (+)
AMCG00016875 NA coding upstream 70138 33035302 ~ 33109567 (+)
AMCG00016873 NA coding upstream 157835 33012918 ~ 33021870 (+)
AMCG00016872 LOC101070426,LOC103367899,LOC104923905 coding upstream 189747 32986580 ~ 32989958 (+)
AMCG00016886 NA coding downstream 27532 33207472 ~ 33221284 (+)
AMCG00016881 NA coding downstream 41594 33221534 ~ 33244483 (+)
AMCG00016883 NA coding downstream 76285 33256225 ~ 33292591 (+)
AMCG00016882 NA coding downstream 113113 33293053 ~ 33301913 (+)
AMCG00016890 NA coding downstream 343948 33523888 ~ 33548644 (+)
G16323 NA non-coding upstream 197375 32981779 ~ 32982330 (+)
G16290 NA non-coding upstream 320689 32857551 ~ 32859016 (+)
G16211 NA non-coding upstream 737120 32438254 ~ 32442585 (+)
G16169 NA non-coding upstream 917033 32261711 ~ 32262672 (+)
G16037 NA non-coding upstream 1424278 31755042 ~ 31755427 (+)
G16351 NA non-coding downstream 299 33180239 ~ 33180439 (+)
G16395 NA non-coding downstream 145154 33325094 ~ 33328342 (+)
G16512 NA non-coding downstream 471141 33651081 ~ 33651289 (+)
G16542 NA non-coding downstream 813242 33993182 ~ 33995382 (+)
G16552 NA non-coding downstream 924516 34104456 ~ 34105687 (+)
G16289 NA other upstream 322265 32856361 ~ 32857440 (+)
AMCG00016854 NA other upstream 676333 32499056 ~ 32503372 (+)
AMCG00016841 NA other upstream 919078 32251808 ~ 32260627 (+)
AMCG00016830 NA other upstream 1428592 31728556 ~ 31751113 (+)
AMCG00016829 NA other upstream 1448259 31701669 ~ 31731446 (+)
AMCG00016880 dcaf7,LOC100702343,LOC105030232,LOC105898766 other downstream 140204 33320144 ~ 33333746 (+)
AMCG00016898 NA other downstream 450072 33630012 ~ 33650080 (+)
AMCG00016901 NA other downstream 488653 33668593 ~ 33674361 (+)
G16546 NA other downstream 867431 34047371 ~ 34047720 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other downstream 913336 34093276 ~ 34099596 (+)

Expression


Co-expression Network