G16356 (fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035)


Basic Information

Item Value
gene id G16356
gene name fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 33176076 ~ 33178883 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20326
tcCAAGCTTAGGTTTGAGGCAACGTGGTGTTCAGACAGTATCATTTAATCAATGAAACACTAAGGCACCAGAGGGTGGCCCCCTGCCCGCACGACCGGGGTACCGCTCAGAAACACCCCCactgatgagagagagagagaaagagagagagagagagagagagagagagagaaagagagagagagagagagagagagggttgtgGGGCATCCAACACCGCTTTCAATATGAAACAGATTCCTTCTCATACATCAGGGCAAAATGATTACAGATCTCGGTCCGACAGAGAAAGTCCAACTGTGTGCCGCGTCAATGCTGCCAACAAAAACACCAGAGGGAGAGACCATAGCTCCATTTATGGAACAAGTGTTTACCAAGGCTGTTTCactcttttctttaaatacaaatatataattatatatcatatgtatatatttttacaaatgctatgtacattacattgaattacaCAACTGCCAAGTTAATCGACCTAAAAAATAAGTCTGTAATAAAACTGAGTTCATACTTTCAAGCATTACAAACCCTTTCAATTCCAAACTGGTCCCTTGcttatatttatgtttgtttttaactctgATGCTTTATAaaggagatgtgtgtgtgagtgtgtgtgtttgtttgtgtgagtgtgagtgtgtgtgtgtgtgtgtgtgagtgagtgagtgagtgagtgaatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgagtgtaggGGACTTCTGCACTCAAAAAGCTGGTCTCCATGCCAGATCAAGTGTCTGTAAAGTCTGGGTTTATCTGGATTCAGTGTAAGAAGgggttcttaaaaaaaaaagtcataataaaataataaaaacacaacttcGGGAGTCTTTGACACAATGAAAAGATGGTGAGCCCGAGTGCCATTTGGCAAAAGCAGGCTGACGTCCAGTTGGCTCAGACTGTGGTCTCCCCCTGCTTACTGTTGGTGAGTCTGGTGTAAAACTTGCGCCACGATTGTAAAGTCTTACCAGACCAGATCCAAAACCCGGAGGTGATCCCCACAATCAGAGTCATGAGATATTTGATCATGTAGACGGTAAAATCCGGAGTCATCCGCGGGGTGTAGTGCATCGGGCAGGGGATGGCCAGGGTCTTGCAGTTGTGGCTGATCCAGCTCCTCTCCCAGTGCTCTCGGAAAGCCTGCTCGTAGAAGAAGCAGGCGATGACGACGGTGGCCGGCACGGTGTACAGCACGCTGAACACCCCGATTCGCACCATGAGCCGCTCCAGCTTCTCCGTCTTAGTGCCGTCGTGCTTCATTATAGTGCGGATGCGGAACAGAGACACAAACCCGGCCAGCAAGAAAGAAGTGCCGATGAACAGGTAGACGAACAGGGGTGCCAGGACGAAGCCACGCAGGGGGTCCAGGTTGTTGAGCCCGACGAAGCAGACGCCGCTCAGCAGGTCGCCATCGATCTGGCCCATGGCGAGGATGCTGATGGTTTTGACAGCTGGCACAGACCAGGCGGCCAGGTGGAAGTACTGCGAATTGGACTCAATGGCTTCGTGTCCCCATTTCATCCCCGCCGCCAGGAACCAAGTCAGCGAGAGGATAACCCACCAAATGGAGCTGGCCATgctgaaaaaatacaacatcATAAACAAGATCGTGCACCCCTCCTTCTTGGTCCCCTGCACCACGGTCTTGTAGCTCTCCGGTGCGAAGCGCTCGTTGCAGACCACTTTGTCATCCAGGAAGAAGCCCGCTATGTAGGCGATGGAGACCATGGTGTAGCAGCCCGACAAGAAAATGATGGGCCGCTCGGGGTATTTAAAGCGCTGCATGTCCACCAAGTAGGTGGTCACCGTGAACAGAGTGGAGGCGCAGCACAGGGAAGACCAGATCAGGATCCAGACCCGGGCGAACCTGATCTCGCTTTCACTGAAGAACATGTATCCGAAGCTTTTTGAAGGCTCGCAGGGCGCCGCACAGTCAGACTCACCCAGgaatttgtaattcaagtagGAAGGCACCTGGAGCACTTTGGGGCATCGGAAAGGCCTGTCCGGGGAGGCATACACGTGAATCCCTTGGGTCCCCGCAGCTGGTACTCGCACCGGCGGGGTGGTGACTGCATGCACCCCGGTCTCCGAGTCGTTCTGGCCCACGCAGATCGGCCCACCGCCGTGCACCGGGAAGTTCTCGCAGCGCAGCCTCTCCGGCCACTGAAAGCCGAATTTGTTCATGAGAGCCTCGCAGCCCTGCTTGGCCCGCTCGCAGATGGACCGACACGGGGGGATGGCTTTCTCCAGCACAGTGCACACCGGGGCATACATGGAGCAGAGGAAGAACTTGAGCTCTGGAGAACACTGCACTTTCACCAGCGGGTAAAACTGATGCACCTCCAAGCCCGCGTCCTCCTGGTTGTAGTGCCCTACTAGATTGGGCATGATGGTCTGGTTGTAGGCAATGTCCGTGCATAGTGGGATGGAGATGGGCTGGCAGAAACCGTGATCCGGGACTGCGATGCCGCTGTCCCCCTGATGCTGCGCCGAGACCCGCAGACAGGAGGGGAGCAGCAGCGCGATCAAAGCGAGAGTCCCCTGTGCGCCCATATCGGCTGCAACTTCTGCGTCTCTCCTCGTCTTccagaagaaaataagaaattcaACTACGGTCCACTTTTAGGTATTCCTTGATTGGTTTTATATATCGTGGCATGAAGAACAGTAATCAGGaatcagttacagctgtaaaaGTACTCCCCGTTCAACTGTTGCCTTCTTGCAGGAGACTGCATGACTTTTTCC

Function

symbol description
fzd2 Predicted to enable Wnt-activated receptor activity and Wnt-protein binding activity. Acts upstream of or within several processes, including Wnt signaling pathway, calcium modulating pathway; heart development; and sensory epithelium regeneration. Located in plasma membrane. Is expressed in several structures, including cardiovascular system; fin; head; head mesenchyme; and mesoderm. Human ortholog(s) of this gene implicated in omodysplasia 2. Orthologous to human FZD2 (frizzled class receptor 2).

NR:

description
PREDICTED: frizzled-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20326 True 2808 TUCP 0.56 1 33176076 33178883

Neighbor

gene id symbol gene type direction distance location
AMCG00016877 pus3 coding downstream 4143 33168630 ~ 33171933 (-)
AMCG00016878 NA coding downstream 15117 33155283 ~ 33160959 (-)
AMCG00016876 dcakd,LOC107667188 coding downstream 27647 33141438 ~ 33148429 (-)
AMCG00016869 NA coding downstream 241570 32931693 ~ 32934506 (-)
AMCG00016870 NA coding downstream 245263 32927031 ~ 32930813 (-)
AMCG00016879 NA coding upstream 12819 33191702 ~ 33195256 (-)
AMCG00016884 ccdc47,LOC107674171,LOC107658463,LOC107729550,LOC107721963 coding upstream 128858 33307741 ~ 33318582 (-)
AMCG00016888 NA coding upstream 154579 33333462 ~ 33348062 (-)
AMCG00016887 kcnh6a,LOC106601567,LOC105012970,LOC108427397,LOC106527280 coding upstream 203001 33381884 ~ 33390755 (-)
AMCG00016893 map3k3,LOC102777599 coding upstream 260669 33439552 ~ 33473811 (-)
G16325 NA non-coding downstream 191612 32984254 ~ 32984464 (-)
G16293 NA non-coding downstream 314479 32859241 ~ 32861597 (-)
G16292 NA non-coding downstream 318611 32854781 ~ 32857465 (-)
G16250 NA non-coding downstream 739393 32434236 ~ 32436683 (-)
G16249 NA non-coding downstream 747996 32427852 ~ 32428080 (-)
G16375 NA non-coding upstream 76770 33255653 ~ 33256382 (-)
G16377 NA non-coding upstream 105131 33284014 ~ 33284227 (-)
G16378 NA non-coding upstream 113148 33292031 ~ 33292249 (-)
G16422 NA non-coding upstream 146203 33325086 ~ 33328341 (-)
G16502 NA non-coding upstream 449217 33628100 ~ 33628919 (-)
AMCG00016859 NA other downstream 668757 32497507 ~ 32507319 (-)
G16247 NA other downstream 752638 32423058 ~ 32423438 (-)
AMCG00016847 NA other downstream 908108 32261549 ~ 32267968 (-)
AMCG00016815 NA other downstream 1787808 31380547 ~ 31388268 (-)
G15787 NA other downstream 2646576 30526292 ~ 30529500 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 212906 33391789 ~ 33434651 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other upstream 309842 33488725 ~ 33513579 (-)
G16563 NA other upstream 927807 34106690 ~ 34107941 (-)
AMCG00016938 NA other upstream 2217109 35395992 ~ 35399030 (-)
G17032 NA other upstream 4579274 37758157 ~ 37758471 (-)

Expression


Co-expression Network