G16510


Basic Information

Item Value
gene id G16510
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 33642978 ~ 33643661 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20507
AAGGACTCCTCGCAGACGCGCACTCTCTCGCAGCCCTCGGGCGGCTCCCTCTGGAAGGAGCAGGTCTTGTTGGGCCGGGGGGAGGAAGACAGCAGCAGCACGGGCGAGGGGCAGCAAAAACCCGGCGGGGGGGAGCAGCCCAACACTCCACTGGACAGGTCTgtgggggagaaagagagacagtcACACTGCAGcctgggagaaggagaagcTCCTTGGGGTCCATCACAGTCACACAGTACTGGACTGTGATCCACAAAAGCACAAAGGTCCTGCATCTCTAATCCCCCTGGGCAGCAGTGCTCAGACAGAAAGGACAATTTTCACTGTATTCACCATCACAGTGCAGCTTTAACGCAGAAATGTGATCCTTTCCTTCTTTTCCGATTTCACAGAACTATATAATTAATTGGGCAAGGCTTAGACAATGAGTGTAGGCATGAAGTAGACGTTCAGATGAAGTATGTGGTCTGTAATAAGCCTTCACTGGAAATCGCTTCCTTTGATTTCAATGTTTTCTGAAGCGATTCTTCCTTGGATCAAAAGCGTCTCTCACTGAACATGAATGTATGTTCATCCACACAGAAAAGAACCTAAGTATAAACACAGCTCAATCCTCCAGGGAAAGGAAGTGATATAGGAGGCAGGGGGCTCCAGTGTGTGTTCTAAAAACAGGTAATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20507 True 684 lncRNA 0.50 1 33642978 33643661

Neighbor

gene id symbol gene type direction distance location
AMCG00016904 LOC107583088 coding downstream 46736 33582724 ~ 33596242 (-)
AMCG00016892 ddx42 coding downstream 67682 33554101 ~ 33575296 (-)
AMCG00016895 NA coding downstream 122904 33513627 ~ 33520074 (-)
AMCG00016894 NA coding downstream 163523 33474010 ~ 33479455 (-)
AMCG00016893 map3k3,LOC102777599 coding downstream 169167 33439552 ~ 33473811 (-)
AMCG00016907 nxph3,LOC105012985,LOC105898539,LOC107092790,LOC106601594 coding upstream 233442 33877103 ~ 33880678 (-)
AMCG00016908 NA coding upstream 356936 34000597 ~ 34008800 (-)
AMCG00016911 LOC105028465,LOC108426558,LOC107655803,LOC107557242 coding upstream 571238 34214899 ~ 34263010 (-)
AMCG00016931 NA coding upstream 1447792 35091453 ~ 35096502 (-)
AMCG00016936 NA coding upstream 1591931 35235592 ~ 35245651 (-)
G16509 NA non-coding downstream 999 33641198 ~ 33641979 (-)
G16505 NA non-coding downstream 8639 33634127 ~ 33634339 (-)
G16502 NA non-coding downstream 14059 33628100 ~ 33628919 (-)
G16422 NA non-coding downstream 314637 33325086 ~ 33328341 (-)
G16378 NA non-coding downstream 350729 33292031 ~ 33292249 (-)
G16511 NA non-coding upstream 548 33644209 ~ 33648440 (-)
G16519 NA non-coding upstream 15972 33659633 ~ 33662283 (-)
G16522 NA non-coding upstream 24935 33668596 ~ 33673557 (-)
G16533 NA non-coding upstream 128047 33771708 ~ 33806422 (-)
G16554 NA non-coding upstream 349529 33993190 ~ 33995260 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other downstream 129399 33488725 ~ 33513579 (-)
AMCG00016889 LOC107570748,LOC106906011 other downstream 208327 33391789 ~ 33434651 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other downstream 464095 33176076 ~ 33178883 (-)
AMCG00016859 NA other downstream 1135659 32497507 ~ 32507319 (-)
G16247 NA other downstream 1219540 32423058 ~ 32423438 (-)
G16563 NA other upstream 463029 34106690 ~ 34107941 (-)
AMCG00016938 NA other upstream 1752331 35395992 ~ 35399030 (-)
G17032 NA other upstream 4114496 37758157 ~ 37758471 (-)
AMCG00016959 NA other upstream 4231589 37875250 ~ 38058939 (-)
G17421 NA other upstream 7572990 41216651 ~ 41217231 (-)

Expression


Co-expression Network