G16512


Basic Information

Item Value
gene id G16512
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 33651081 ~ 33651289 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20509
TGTAAAGGCTATTAAacttttattcttttatataAATTTGAATAATCCACAAATCCAAGTTACCAGATAATGCTGTGTTGGAGTCTGCTCCCTTTTGTGCTGGGTTGGGTTTCATAAATGGATCTTCcccatgtttattttaaatcaagtgGGATCTGTAAGCAGTCCTAActctattaaattaaatctcggcaaaataaagaaatcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20509 True 209 lncRNA 0.33 1 33651081 33651289

Neighbor

gene id symbol gene type direction distance location
AMCG00016902 NA coding upstream 22792 33625976 ~ 33628289 (+)
AMCG00016896 NA coding upstream 26546 33619292 ~ 33624535 (+)
AMCG00016899 NA coding upstream 33597 33597162 ~ 33617484 (+)
AMCG00016903 NA coding upstream 53969 33580309 ~ 33597112 (+)
AMCG00016900 strada coding upstream 70976 33569412 ~ 33580105 (+)
AMCG00016897 s35b1,slc35b1,LOC106601597,LOC107590797 coding downstream 1628 33652917 ~ 33662307 (+)
AMCG00016906 spop,LOC107754841 coding downstream 110129 33761418 ~ 33773533 (+)
AMCG00016905 spop coding downstream 139998 33791287 ~ 33801810 (+)
AMCG00016910 NA coding downstream 518199 34169488 ~ 34191749 (+)
AMCG00016913 ptrf,LOC103029568,LOC105905374,LOC105028466,LOC107742253,LOC107664665,LOC103381660 coding downstream 617709 34268998 ~ 34271418 (+)
G16395 NA non-coding upstream 322739 33325094 ~ 33328342 (+)
G16351 NA non-coding upstream 470642 33180239 ~ 33180439 (+)
G16350 NA non-coding upstream 471141 33179705 ~ 33179940 (+)
G16323 NA non-coding upstream 668751 32981779 ~ 32982330 (+)
G16290 NA non-coding upstream 792065 32857551 ~ 32859016 (+)
G16542 NA non-coding downstream 341893 33993182 ~ 33995382 (+)
G16552 NA non-coding downstream 453167 34104456 ~ 34105687 (+)
G16646 NA non-coding downstream 946533 34597822 ~ 34599917 (+)
G16668 NA non-coding downstream 1085048 34736337 ~ 34736549 (+)
G16692 NA non-coding downstream 1124536 34775825 ~ 34777047 (+)
AMCG00016898 NA other upstream 1001 33630012 ~ 33650080 (+)
AMCG00016880 dcaf7,LOC100702343,LOC105030232,LOC105898766 other upstream 317335 33320144 ~ 33333746 (+)
G16289 NA other upstream 793641 32856361 ~ 32857440 (+)
AMCG00016854 NA other upstream 1147709 32499056 ~ 32503372 (+)
AMCG00016841 NA other upstream 1390454 32251808 ~ 32260627 (+)
AMCG00016901 NA other downstream 17304 33668593 ~ 33674361 (+)
G16546 NA other downstream 396082 34047371 ~ 34047720 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other downstream 441987 34093276 ~ 34099596 (+)
G16550 NA other downstream 449026 34100315 ~ 34100863 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other downstream 1507308 35158597 ~ 35204232 (+)

Expression


Co-expression Network