G16546


Basic Information

Item Value
gene id G16546
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 34047371 ~ 34047720 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU20550
GCATCGCGGTACCCATGTTGTCCCCTCACAGCTCTTCAGCGGCtcgcaggcaggcaggcaggcttAGCGTTATCGGTAAAATACCAATATCCTTTTGGGGaagtttaatttctttcagatctagtataaaaaaaagaatgatctCTAATAGTTTCTGGAGTTGTCCTTTAATTAGAGGTCTGTCCTTATATAAGCTTCTCCTCGCCCTGGGATGTCGTTCAGCCCGCGGTGCTTCGCAGTGCGTGTGCGCTGTGCGGGACCCCTGGCCGAGTGTGGCAGGTTGTTGCGGGGCgcaggaggagaggagacacTGGGGTCGCGGTGAGACGTGGCCGTGTTCTTGCTTTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20550 True 350 TUCP 0.53 1 34047371 34047720

Neighbor

gene id symbol gene type direction distance location
AMCG00016905 spop coding upstream 245561 33791287 ~ 33801810 (+)
AMCG00016906 spop,LOC107754841 coding upstream 273838 33761418 ~ 33773533 (+)
AMCG00016897 s35b1,slc35b1,LOC106601597,LOC107590797 coding upstream 385064 33652917 ~ 33662307 (+)
AMCG00016902 NA coding upstream 419082 33625976 ~ 33628289 (+)
AMCG00016896 NA coding upstream 422836 33619292 ~ 33624535 (+)
AMCG00016910 NA coding downstream 121768 34169488 ~ 34191749 (+)
AMCG00016913 ptrf,LOC103029568,LOC105905374,LOC105028466,LOC107742253,LOC107664665,LOC103381660 coding downstream 221278 34268998 ~ 34271418 (+)
AMCG00016914 ptrfb,LOC105935706,LOC102209316,LOC102787483,LOC101465061,LOC103482185,LOC103142478 coding downstream 246493 34294213 ~ 34296833 (+)
AMCG00016912 stat3,LOC107653351 coding downstream 263148 34310868 ~ 34340346 (+)
AMCG00016916 NA coding downstream 312507 34360227 ~ 34435938 (+)
G16542 NA non-coding upstream 51989 33993182 ~ 33995382 (+)
G16512 NA non-coding upstream 396082 33651081 ~ 33651289 (+)
G16395 NA non-coding upstream 719029 33325094 ~ 33328342 (+)
G16351 NA non-coding upstream 866932 33180239 ~ 33180439 (+)
G16350 NA non-coding upstream 867431 33179705 ~ 33179940 (+)
G16552 NA non-coding downstream 56736 34104456 ~ 34105687 (+)
G16646 NA non-coding downstream 550102 34597822 ~ 34599917 (+)
G16668 NA non-coding downstream 688617 34736337 ~ 34736549 (+)
G16692 NA non-coding downstream 728105 34775825 ~ 34777047 (+)
G16698 NA non-coding downstream 773477 34821197 ~ 34821413 (+)
AMCG00016901 NA other upstream 373010 33668593 ~ 33674361 (+)
AMCG00016898 NA other upstream 397291 33630012 ~ 33650080 (+)
AMCG00016880 dcaf7,LOC100702343,LOC105030232,LOC105898766 other upstream 713625 33320144 ~ 33333746 (+)
G16289 NA other upstream 1189931 32856361 ~ 32857440 (+)
AMCG00016854 NA other upstream 1543999 32499056 ~ 32503372 (+)
AMCG00016909 mien1,LOC107566883,LOC107755209 other downstream 45556 34093276 ~ 34099596 (+)
G16550 NA other downstream 52595 34100315 ~ 34100863 (+)
AMCG00016934 acly,aclya,LOC103369716,LOC108273769 other downstream 1110877 35158597 ~ 35204232 (+)
G17193 NA other downstream 4448331 38496051 ~ 38503632 (+)
AMCG00016979 NA other downstream 5191353 39239073 ~ 39254490 (+)

Expression


Co-expression Network